result

Gene information

Detail information of g393291


Location
GeneChrStartEndStrand
g393291Scaffold_75958:HRSCAF_4590442124330795-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY64703.13.3e-117Chitin elicitor receptor kinase 1
SwissprotA0A0P0XII1.15.1e-99LysM domain receptor-like kinase 9
trEMBLA0A199UIZ52.3e-117Chitin elicitor receptor kinase 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G21630.156.807e-104 374AtCERK1;AtLYK1;CERK1;LYK1;LYSM RLK1chitin elicitor receptor kinase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag1039.t1; g235354.t1; g271431.t1; g27304.t1; g279802.t1; g300907.t1; g302680.t1; g316765.t1; g316766.t1; g33059.t1; g378422.t1; g383008.t1; g393291.t1; g481938.t1; g521281.t1; g530779.t1; g86512.t1
Allium fistulosumAfisC2G04837; AfisC8G02748
Allium sativumAsa1G02497.1; Asa1G02498.1; Asa6G01365.1; Asa6G01366.1; Asa6G02400.1; Asa6G02401.1
Arabidopsis thalianaAT3G21630.1
Oryza sativaLOC_Os08g42580.1; LOC_Os08g42580.4; LOC_Os09g33630.1; LOC_Os09g33630.2; LOC_Os09g33630.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07714.14Pkinase_TyrDomain181323117.84.5e-34

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0002218Pactivation of innate immune response
GO:0002220Pinnate immune response activating cell surface receptor signaling pathway
GO:0002221Ppattern recognition receptor signaling pathway
GO:0002237Presponse to molecule of bacterial origin
GO:0002238Presponse to molecule of fungal origin
GO:0002253Pactivation of immune response
GO:0002376Pimmune system process
GO:0002429Pimmune response-activating cell surface receptor signaling pathway
GO:0002682Pregulation of immune system process
GO:0002684Ppositive regulation of immune system process
GO:0002752Pcell surface pattern recognition receptor signaling pathway
GO:0002757Pimmune response-activating signal transduction
GO:0002758Pinnate immune response-activating signal transduction
GO:0002764Pimmune response-regulating signaling pathway
GO:0002768Pimmune response-regulating cell surface receptor signaling pathway
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0050832Pdefense response to fungus
GO:0003824Fcatalytic activity
GO:0005773Cvacuole
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0004888Ftransmembrane signaling receptor activity
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0007178Ptransmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005488Fbinding
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0005775Cvacuolar lumen
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0007154Pcell communication
GO:0007166Pcell surface receptor signaling pathway
GO:0007167Penzyme linked receptor protein signaling pathway
GO:0046983Fprotein dimerization activity
GO:0008061Fchitin binding
GO:0008144Fdrug binding
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0042493Presponse to drug
GO:0009593Pdetection of chemical stimulus
GO:0009595Pdetection of biotic stimulus
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0009608Presponse to symbiont
GO:0009609Presponse to symbiotic bacterium
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009620Presponse to fungus
GO:0009719Presponse to endogenous stimulus
GO:0009814Pdefense response, incompatible interaction
GO:0009817Pdefense response to fungus, incompatible interaction
GO:0009877Pnodulation
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019899Fenzyme binding
GO:0019199Ftransmembrane receptor protein kinase activity
GO:0019538Pprotein metabolic process
GO:0019900Fkinase binding
GO:0019901Fprotein kinase binding
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0044403Psymbiosis, encompassing mutualism through parasitism
GO:0031347Pregulation of defense response
GO:0031349Ppositive regulation of defense response
GO:0031974Cmembrane-enclosed lumen
GO:0032490Pdetection of molecule of bacterial origin
GO:0032491Pdetection of molecule of fungal origin
GO:0032494Presponse to peptidoglycan
GO:0032499Pdetection of peptidoglycan
GO:0035690Pcellular response to drug
GO:0036211Pprotein modification process
GO:0038023Fsignaling receptor activity
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043167Fion binding
GO:0043169Fcation binding
GO:0043170Pmacromolecule metabolic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043233Corganelle lumen
GO:0043412Pmacromolecule modification
GO:0043621Fprotein self-association
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044419Pinterspecies interaction between organisms
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044437Cvacuolar part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0045088Pregulation of innate immune response
GO:0045089Ppositive regulation of innate immune response
GO:0046777Pprotein autophosphorylation
GO:0048518Ppositive regulation of biological process
GO:0048583Pregulation of response to stimulus
GO:0048584Ppositive regulation of response to stimulus
GO:0050776Pregulation of immune response
GO:0050778Ppositive regulation of immune response
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051606Pdetection of stimulus
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060089Fmolecular transducer activity
GO:0065007Pbiological regulation
GO:0070013Cintracellular organelle lumen
GO:0070405Fammonium ion binding
GO:0071216Pcellular response to biotic stimulus
GO:0071219Pcellular response to molecule of bacterial origin
GO:0071310Pcellular response to organic substance
GO:0071323Pcellular response to chitin
GO:0071417Pcellular response to organonitrogen compound
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:0080134Pregulation of response to stress
GO:0097367Fcarbohydrate derivative binding
GO:0098542Pdefense response to other organism
GO:0098581Pdetection of external biotic stimulus
GO:1901564Porganonitrogen compound metabolic process
GO:1901698Presponse to nitrogen compound
GO:1901699Pcellular response to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:2001080Fchitosan binding
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13429CERK1; chitin elicitor receptor kinase 1EC:- Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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