Detail information of g393336


Location
GeneChrStartEndStrand
g393336Scaffold_75967:HRSCAF_45905399078100468+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020255769.11.4e-06tRNA (cytosine(34)-C(5))-methyltransferase isoform X1
trEMBLD6MJZ03.8e-06Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G18160.145.881e-1061.6ATBZIP2;bZIP2;FTM3;GBF5basic leucine-zipper 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag132971.t1; g184062.t1; g23890.t1; g255690.t1; g268657.t1; g286523.t1; g294080.t1; g331020.t1; g332697.t1; g332698.t1; g393336.t1; g397714.t1; g61739.t1
Allium fistulosumAfisC1G03462; AfisC1G03735; AfisC1G05525; AfisC2G01259; AfisC2G02600; AfisC2G04032; AfisC2G08612; AfisC3G03796; AfisC3G05087; AfisC3G05607; AfisC4G02919; AfisC4G06288; AfisC4G06620; AfisC5G02973; AfisC5G03181; AfisC6G00892; AfisC7G03720; AfisC8G03512; AfisS1301G00002
Allium sativumAsa2G04074.1; Asa3G01906.1; Asa4G04404.1; Asa5G02531.1; Asa7G05124.1; Asa8G05408.1
Arabidopsis thalianaAT1G75390.1; AT1G75390.2; AT2G18160.1; AT3G62420.1; AT4G34590.1; AT5G15830.1
Oryza sativaLOC_Os02g03960.1; LOC_Os02g09830.1; LOC_Os06g09250.1; LOC_Os06g42140.1; LOC_Os12g37410.1; LOC_Os12g37415.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00170.18bZIP_1Family204829.17e-07

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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