result

Gene information

Detail information of g405878

Location

Gene	Chr	Start	End	Strand
g405878	Scaffold_77455:HRSCAF_460541	1180292	1182545	+

Sequences

CDS

>g405878.t1
ATGAGAGTGCAATCAAGTATCAAAACGCATACACTCCTCCATTCTCATTCCTTTGCTGTTCAATTGATGATAATGAACTACTCTCAACCAAGCAATGTCTACATGTACATTATATTCCCTTCCTTCGTCACCTTTATACTCTTATCATTCTTCATACTTCGCTCTTCAAGAGCTAGCACTAACACAAACTCACCTCCATCTCCTTCCAAACTTCCGTTAATCGGAAACCTACATCAGTTCGGTTCACTCCCTCATCGCACGCTACACGCACTATCGAAGACACATGGCCCTATAATGTCCATGCAAATAGGCCATGTCCCTACAATCATAGTCTCTTCTGCAGACATTGCTGCCGACATAATGAAAACACTAGACCTTAGCTTTGCTTCCAGGCCGTACAGCGCCATGGCCAAGTCACTTCTGTACAATTGTGACATAGCATTTGCACCATATGGTGAGTATTGGAGGCAAGCAAAGAAAATATTTGTAGTGCACTTATTGAGCAACAAGATGGTGCAGACCTTTCGATGTATTAGGGAAGAAGAGGTTGAGATTATGATTAGGAAGATTTATGAAGAAGAGTTGAATTTGGTGAATTTGAGTGACTTGATCGTAGGACTTAATAATGACATTATATGTAGAGTGGCTTTGGGGAAGAAGTACAGTGGTGAAGTGGGCGATGCACGTAGAATAAAGTGTATGTTACATGAGTTTTTGGAGTTGATGGGTTCTTTTCCTATTGGGGATTTCATTCCTTGGCTTTCCTGGGTGGATGGTTTGAGTGGTTTGAAGTCGAGGGTTAAAAGGAGCTTTTGTCAACTCGATGAGTTTCTAGAAGGAGTGATAGAAGAACATATTCAAGCCAGGAAAGATGGTGGCAAAAGTTACAATGATGGACGTGGTGATTTTGTAGATCTTTTGCTGTCTATCGAAGAGAACGATGAAAGTGTTGGTATTTCATTTGGTAGGAATAATGTCAAAGCACTGATTTTGGATGCATTTGCTGCGGGAACTGACACAACATCCACAGTCACAGAATGGGCAATGGCCGAGCTTATAACAAACCCGAAAATAATGAAAAGGGCTCAAAAAGAGATACGAGAAGTTGGTGTGCATGGTCAGTATATAACAGACAAGGACGTAGATAAAATGATATATTTGAAGGCCATAGTGAAAGAAACTCTGAGGCTGCATCCTCCAGTGCCTCTACTGGTTCCTCGTGAGACAATTCATGAGGTTGAACTAAAAGGCTATCACATTCCCAAGGGAACGAGAGTTATGGTAAATGCTTGGGCTATTGGACAAGATAAAAGAACATGGGAGAACCCTGAAGAATTCTTTCCAGCTAGATTTATAGATAATGATATTGATTTTAGAGGACAAGATTTTGAGTTTATTCCATTTGGAGCAGGTAGAAGAATTTGCCCTGCAGTTAATTTTGCAATTCCTGCTGTGGAACTTGCTCTTGCAAATTTGCTGCATAATTTTGACTGGGAAGTTCCAAAAATGATGGAAAAAGAAGTAACAGATATGAGCGAAAGTCCTGGACTGACCATACACAAGAAGCATGGCCTTGTTCTTGTTGCCAAACCATGGAAATTTTAA

Protein

Gene

>g405878.t1
ATGAGAGTGCAATCAAGTATCAAAACGGTTATATCAGATGCAACAATTCAAATAACAAATAAACTTCAGCCATTGCTTGCGTTGAGAATCGTGAAGAATTTATTCACTTAAGTAATAAATTGCTACCGCTAATCTACTGTATCAAAAAGGTATTCATCACCATGAATAAGCAAGAAAATTGCTACCTCTGGTTCCTAAGAATATAGCAAACTACAAATTTAGAAAATACTATGAATTTACAACAAACGCCTTCCGTAACTCACGTCAGTTATGGGGTCGGCTGCGGAATCTTTTTGTTTACGTATTAAAATTGTATTTCATGTTCACTTTCACATTTAAATATCTCTATATTTTGTCTGTTACGAAAGATTCCCGTTCCAAAGACAGCACGTCTTTTTGTTCCAAAGACAGCACGTCTTTTGTCTTCACGTTCCAAAGACAGCACGTCTTTTGTCTTCTTCTATACAAAGTCGTCCAAAGTTGACGTCTATGTTTATTCATTTCCCAGACACCTCAAACGCCACCGATTATATATGATCATCAAAAATTCACATCATAGCATACACTCCTCCATTCTCATTCCTTTGCTGTTCAATTGATGATAATGAACTACTCTCAACCAAGCAATGTCTACATGTACATTATATTCCCTTCCTTCGTCACCTTTATACTCTTATCATTCTTCATACTTCGCTCTTCAAGAGCTAGCACTAACACAAACTCACCTCCATCTCCTTCCAAACTTCCGTTAATCGGAAACCTACATCAGTTCGGTTCACTCCCTCATCGCACGCTACACGCACTATCGAAGACACATGGCCCTATAATGTCCATGCAAATAGGCCATGTCCCTACAATCATAGTCTCTTCTGCAGACATTGCTGCCGACATAATGAAAACACTAGACCTTAGCTTTGCTTCCAGGCCGTACAGCGCCATGGCCAAGTCACTTCTGTACAATTGTGACATAGCATTTGCACCATATGGTGAGTATTGGAGGCAAGCAAAGAAAATATTTGTAGTGCACTTATTGAGCAACAAGATGGTGCAGACCTTTCGATGTATTAGGGAAGAAGAGGTTGAGATTATGATTAGGAAGATTTATGAAGAAGAGTTGAATTTGGTGAATTTGAGTGACTTGATCGTAGGACTTAATAATGACATTATATGTAGAGTGGCTTTGGGGAAGAAGTACAGTGGTGAAGTGGGCGATGCACGTAGAATAAAGTGTATGTTACATGAGTTTTTGGAGTTGATGGGTTCTTTTCCTATTGGGGATTTCATTCCTTGGCTTTCCTGGGTGGATGGTTTGAGTGGTTTGAAGTCGAGGGTTAAAAGGAGCTTTTGTCAACTCGATGAGTTTCTAGAAGGAGTGATAGAAGAACATATTCAAGCCAGGAAAGATGGTGGCAAAAGTTACAATGATGGACGTGGTGATTTTGTAGATCTTTTGCTGTCTATCGAAGAGAACGATGAAAGTGTTGGTATTTCATTTGGTAGGAATAATGTCAAAGCACTGATTTTGGTATGTTCCTTTTAACACCTTTTGTTGTAACGGTTAACCTCCAAAGTCCAAACTGAAACCATAGCCTGAAAAGAGTATATATTGAAAGATATATTGAAAGATTGTTAAATTTTGCAGGATGCATTTGCTGCGGGAACTGACACAACATCCACAGTCACAGAATGGGCAATGGCCGAGCTTATAACAAACCCGAAAATAATGAAAAGGGCTCAAAAAGAGATACGAGAAGTTGGTGTGCATGGTCAGTATATAACAGACAAGGACGTAGATAAAATGATATATTTGAAGGCCATAGTGAAAGAAACTCTGAGGCTGCATCCTCCAGTGCCTCTACTGGTTCCTCGTGAGACAATTCATGAGGTTGAACTAAAAGGCTATCACATTCCCAAGGGAACGAGAGTTATGGTAAATGCTTGGGCTATTGGACAAGATAAAAGAACATGGGAGAACCCTGAAGAATTCTTTCCAGCTAGATTTATAGATAATGATATTGATTTTAGAGGACAAGATTTTGAGTTTATTCCATTTGGAGCAGGTAGAAGAATTTGCCCTGCAGTTAATTTTGCAATTCCTGCTGTGGAACTTGCTCTTGCAAATTTGCTGCATAATTTTGACTGGGAAGTTCCAAAAATGATGGAAAAAGAAGTAACAGATATGAGCGAAAGTCCTGGACTGACCATACACAAGAAGCATGGCCTTGTTCTTGTTGCCAAACCATGGAAATTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020270362.1	1.1e-169	cytochrome P450 71A1-like
Swissprot	Q9STK8.1	2.4e-129	Cytochrome P450 71A25
trEMBL	A0A5P1EKY3	7.8e-170	Cytochrome P450 71A9-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G48280.1	46.44	5e-134	474	CYP71A25	cytochrome P450, family 71, subfamily A, polypeptide 25

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g405878	AT3G48280.1	491	249	7	44	532	10	488	46.44	5e-134	474
g405878	AT3G48310.1	467	230	6	57	521	25	478	47.54	6e-134	474
g405878	AT3G48270.1	478	244	5	54	529	21	485	45.82	1e-132	470

Ortholog group

Species	Genes
Allium cepa	g290913.t1; g405878.t1
Allium fistulosum	AfisC3G00327; AfisC3G00334
Allium sativum	Asa0G01003.1; Asa2G00473.1
Arabidopsis thaliana	AT3G48270.1; AT3G48280.1; AT3G48290.1; AT3G48290.2; AT3G48300.1; AT3G48310.1; AT3G48320.1; AT4G13310.1; AT5G24960.1
Oryza sativa	LOC_Os01g12760.1; LOC_Os01g12770.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	65	526	342.4	3.4e-102

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00512	CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase	EC:1.14.14.19 1.14.14.32	Steroid hormone biosynthesis	ko00140
			Ovarian steroidogenesis	ko04913
			Prolactin signaling pathway	ko04917
			Cortisol synthesis and secretion	ko04927
K07408	CYP1A1; cytochrome P450 family 1 subfamily A polypeptide 1	EC:1.14.14.1	Steroid hormone biosynthesis	ko00140
			Tryptophan metabolism	ko00380
			Retinol metabolism	ko00830
			Metabolism of xenobiotics by cytochrome P450	ko00980
			Ovarian steroidogenesis	ko04913
K07410	CYP1B1; cytochrome P450 family 1 subfamily B polypeptide 1	EC:1.14.14.1	Steroid hormone biosynthesis	ko00140
			Tryptophan metabolism	ko00380
			Metabolism of xenobiotics by cytochrome P450	ko00980
			Ovarian steroidogenesis	ko04913
K14985	CYP18A1; 26-hydroxylase	EC:1.14.-.-	Insect hormone biosynthesis	ko00981

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network