result

Gene information

Detail information of g414725

Location

Gene	Chr	Start	End	Strand
g414725	Scaffold_78482:HRSCAF_461568	194537	195001	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	AXY87704.1	2.3e-35	ethylene-responsive transcription factor ERF-like protein
Swissprot	O22174.1	1.6e-33	Ethylene-responsive transcription factor ERF008
trEMBL	A0A455LAF4	1.6e-35	Ethylene-responsive transcription factor ERF-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23340.1	54.93	7e-36	146	DEAR3	DREB and EAR motif protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g414725	AT2G23340.1	142	46	3	27	151	26	166	54.93	7e-36	146
g414725	AT4G36900.1	105	31	1	22	121	23	127	65.71	1e-32	135
g414725	AT5G67190.1	100	29	2	22	121	14	109	67.00	2e-32	135

Ortholog group

Species	Genes
Allium cepa	g329855.t1; g414725.t1; g434111.t1
Allium fistulosum	AfisC4G05832; AfisC4G05861; AfisC5G00809; AfisC5G01690; AfisC6G02806; AfisC6G02835
Allium sativum	Asa5G04869.1; Asa6G06452.1; Asa6G06455.1; Asa8G03945.1
Arabidopsis thaliana	AT1G46768.1; AT2G23340.1; AT3G50260.1; AT4G06746.1; AT5G67190.1
Oryza sativa	LOC_Os04g55520.1; LOC_Os06g07030.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	29	77	38.2	1.1e-09

Gene Ontology

Accession	Ontology	Name
GO:0001101	P	response to acid chemical
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009266	P	response to temperature stimulus
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009415	P	response to water
GO:0009628	P	response to abiotic stimulus
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0010035	P	response to inorganic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0042221	P	response to chemical
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1901700	P	response to oxygen-containing compound
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network