result

Gene information

Detail information of g414951


Location
GeneChrStartEndStrand
g414951Scaffold_78514:HRSCAF_46160071351104255+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264457.12.9e-147uncharacterized protein LOC109840292 isoform X2
SwissprotB6TVL4.13.4e-92Sulfurtransferase 3
trEMBLA0A8T3BF321.4e-124Rhodanese domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G23060.162.614e-123 440CaScalcium sensing receptor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag219655.t1; g414951.t1; g539839.t1
Allium fistulosumAfisC1G04998; AfisC6G01777; AfisC6G01786
Allium sativumAsa4G05400.1; Asa8G04781.1
Arabidopsis thalianaAT3G53680.1
Oryza sativaLOC_Os03g17050.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily48454163.21.8e-17
PF00581.17RhodaneseDomain1149126523.55.7e-05

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0016020Cmembrane
GO:0005739Cmitochondrion
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009314Presponse to radiation
GO:0010038Presponse to metal ion
GO:0009416Presponse to light stimulus
GO:0009507Cchloroplast
GO:0009534Cchloroplast thylakoid
GO:0009535Cchloroplast thylakoid membrane
GO:0009536Cplastid
GO:0009579Cthylakoid
GO:0009628Presponse to abiotic stimulus
GO:0009639Presponse to red or far red light
GO:0009640Pphotomorphogenesis
GO:0009704Pde-etiolation
GO:0009791Ppost-embryonic development
GO:0009987Pcellular process
GO:0010035Presponse to inorganic substance
GO:0010119Pregulation of stomatal movement
GO:0070887Pcellular response to chemical stimulus
GO:0031976Cplastid thylakoid
GO:0031984Corganelle subcompartment
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0034357Cphotosynthetic membrane
GO:0042221Presponse to chemical
GO:0042651Cthylakoid membrane
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044434Cchloroplast part
GO:0044435Cplastid part
GO:0044436Cthylakoid part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051592Presponse to calcium ion
GO:0051716Pcellular response to stimulus
GO:0055035Cplastid thylakoid membrane
GO:0065007Pbiological regulation
GO:0071241Pcellular response to inorganic substance
GO:0071248Pcellular response to metal ion
GO:0071277Pcellular response to calcium ion
GO:0090333Pregulation of stomatal closure

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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