result

Gene information

Detail information of g421063

Location

Gene	Chr	Start	End	Strand
g421063	Scaffold_79247:HRSCAF_462333	74123	75995	-

Sequences

CDS

>g421063.t1
ATGGATACTTCATTGCTACCAAGTATACTTTTCATTGTATCTATATTTCTTGTGATTGTACTGGCACAAAGAAAAAGTACAGGAAATAGCACAAAATATAATCTACCACCAGGGCCAATTAACCTGCCGATAATTGGAAACCTTCACAATCTTGGAGAGCTCCCGCATCATTCATTTTACAAATTCTCTCAAAAATATGGTCCTCTTGTTTACTTCAAAGTAGGCAGCATCCCCACAATAGTTGCTTCTTCCGTTGAAACTGCAAAAGAATTCTTGAAAACCAACGATCTCAATTGTTGCAGCAGACCACTTCTGACCTCTTTAGAAAAATTAAGCTATGGCTTTCGTGACGTTGCCTTTATACCATATGGTCAAGAATGGAGAATTCTACGCAAAATTTGTATCATCCAGCTCTTCAATACAAAAAAGATTGCATCATTCCGATCTATCAGAGAAGAAGAGGTCGAAAAGATGATCAGAAATATATCATTTTCGCAAAATACAGAAATTAATCTAGGAGAGGAGCTTATGTTGCTTGCCAATAACATTACATGTAGGACTGCATTCGGAAAACAGTATTTGAATGATGGTGGTGGTGCGAAGGTGCATGAGATATTAAAGGAAACCCAAGCTTTATTCATGGCTTTCTTCTATGCTGATTATGTACCCATGCTCGGATGGCTTGATTTTGTTAATGGGATGCATACTAGGTTAGACAAGAATTTTCTTGAACTCGATGAAATATATGATCAGGTTATTGAGGCACATATCAACAAAGAAGATTGTTTTAAAAGTGGCACCAATACTGCTGAAGATATTGTCGATTCTCTATTAAGTATACAAAGGACTTCAAATGAGTTGACCATTGAGCAGATTAAGGGAATCCTTATGAATATATTTGTAGCAGGGTCGGATACATCCTCAGCAGCAGTTGAATGGGCAATGACAGAACTTATGAGAAATCCGAAAGCAATGAAAAAAGCACAAGAAGAAGTAAGAGGAGTGTTCATGAAAAAGGAAGGGAAAATAGAAGAAAGTGAGATGGACAAGCTTACATATATGAAATGTGTATTAAAGGAGACAATGAGAATGCACCCACCAGTGCCGTTACTTGTTCAAAGAGAGACTATGCAGCATTTCAAGGTGGACGGCTATGATATTCTTCCCAAAACAAGATTGATGATTAACGTGTGGGCAATTGGAAGAGATCCAAATGTTTGGGAGAAGCCTAACGAATTCTGTCCAGAGAGATTTATGGATAGTTCAGTTAACTTTTTGGGACATGATTTTGAACTAATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGACTTGCTGTGGTTGAGATTGCTTTGGCAAATTTACTATATCATTTTGATTGGAAGTTGCCGGAAGGAACGACGATAGAGGATATTGATATGGGTGAGTCTCCTGGAGTTACTGTGCATAGAAAATCTCCACTTAAACTCATGGCTGTGCCTGTGAATCATGGAGAAGACTGA

Protein

Gene

>g421063.t1
ATGGATACTTCATTGCTACCAAGTATACTTTTCATTGTATCTATATTTCTTGTGATTGTACTGGCACAAAGAAAAAGTACAGGAAATAGCACAAAATATAATCTACCACCAGGGCCAATTAACCTGCCGATAATTGGAAACCTTCACAATCTTGGAGAGCTCCCGCATCATTCATTTTACAAATTCTCTCAAAAATATGGTCCTCTTGTTTACTTCAAAGTAGGCAGCATCCCCACAATAGTTGCTTCTTCCGTTGAAACTGCAAAAGAATTCTTGAAAACCAACGATCTCAATTGTTGCAGCAGACCACTTCTGACCTCTTTAGAAAAATTAAGCTATGGCTTTCGTGACGTTGCCTTTATACCATATGGTCAAGAATGGAGAATTCTACGCAAAATTTGTATCATCCAGCTCTTCAATACAAAAAAGATTGCATCATTCCGATCTATCAGAGAAGAAGAGGTCGAAAAGATGATCAGAAATATATCATTTTCGCAAAATACAGAAATTAATCTAGGAGAGGAGCTTATGTTGCTTGCCAATAACATTACATGTAGGACTGCATTCGGAAAACAGTATTTGAATGATGGTGGTGGTGCGAAGGTGCATGAGATATTAAAGGAAACCCAAGCTTTATTCATGGCTTTCTTCTATGCTGATTATGTACCCATGCTCGGATGGCTTGATTTTGTTAATGGGATGCATACTAGGTTAGACAAGAATTTTCTTGAACTCGATGAAATATATGATCAGGTTATTGAGGCACATATCAACAAAGAAGATTGTTTTAAAAGTGGCACCAATACTGCTGAAGATATTGTCGATTCTCTATTAAGTATACAAAGGACTTCAAATGAGTTGACCATTGAGCAGATTAAGGGAATCCTTATGGTAATAACTTTCATTTGATTTATTCATTTATTTTAGTTAAAGACCATATCACTAGATCTTTTAGCCATACATGATAGGAGTTTATGTCTGTGATATAACCCACCGCAAAAGGTTAAATATAATAATAGTTTAATACAAATGTACCAGATTAATTATTCCTATCCAACCTTTCCATAGACCTGAAAATAACGCATTACACATACATGGAGCTGTCTGGATATGTATCCTGGAAGTTGTAGTAGTGGTACAGTAATGATTCTGTACCATCAGTAAAATTCATTGTTCTATAGTACATAATAAGGTTCCATATTTATCGATCATAGATTGGTTATTTGGTAATAATTATTTTTCTTTCTAGAATATATTTGTAGCAGGGTCGGATACATCCTCAGCAGCAGTTGAATGGGCAATGACAGAACTTATGAGAAATCCGAAAGCAATGAAAAAAGCACAAGAAGAAGTAAGAGGAGTGTTCATGAAAAAGGAAGGGAAAATAGAAGAAAGTGAGATGGACAAGCTTACATATATGAAATGTGTATTAAAGGAGACAATGAGAATGCACCCACCAGTGCCGTTACTTGTTCAAAGAGAGACTATGCAGCATTTCAAGGTGGACGGCTATGATATTCTTCCCAAAACAAGATTGATGATTAACGTGTGGGCAATTGGAAGAGATCCAAATGTTTGGGAGAAGCCTAACGAATTCTGTCCAGAGAGATTTATGGATAGTTCAGTTAACTTTTTGGGACATGATTTTGAACTAATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGACTTGCTGTGGTTGAGATTGCTTTGGCAAATTTACTATATCATTTTGATTGGAAGTTGCCGGAAGGAACGACGATAGAGGATATTGATATGGGTGAGTCTCCTGGAGTTACTGTGCATAGAAAATCTCCACTTAAACTCATGGCTGTGCCTGTGAATCATGGAGAAGACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264444.1	1.3e-172	cytochrome P450 71A9-like
Swissprot	O81970.1	6.5e-129	Cytochrome P450 CP1
trEMBL	A0A6I9QAU4	3.7e-153	cytochrome P450 71A1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G13080.1	45.80	2e-127	452	CYP71B2	cytochrome P450, family 71, subfamily B, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g421063	AT1G13080.1	500	252	7	10	497	7	499	45.80	2e-127	452
g421063	AT5G57260.1	476	233	7	36	497	31	498	46.43	1e-126	450
g421063	AT3G26180.1	481	241	6	32	500	27	502	46.36	2e-126	449

Ortholog group

Species	Genes
Allium cepa	g188955.t1; g188956.t1; g374713.t1; g421063.t1; g422708.t1; g95344.t1; g95346.t1
Allium fistulosum	AfisC4G07006; AfisC5G02654; AfisC5G02688; AfisC5G02689; AfisC5G02694; AfisC5G02707
Allium sativum	Asa0G03530.1; Asa0G05283.1; Asa4G00056.1; Asa4G00057.1; Asa4G01625.1; Asa4G04440.1; Asa4G04446.1; Asa4G04449.1; Asa4G04451.1; Asa4G04481.1; Asa5G05828.1; Asa8G01235.1
Arabidopsis thaliana	AT1G13080.1; AT1G13100.1; AT3G26150.1; AT3G26160.1; AT3G26180.2; AT3G26220.1; AT3G26230.1; AT3G26270.1; AT3G26280.1
Oryza sativa	LOC_Os12g32850.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	36	489	320.0	2.2e-95

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20617	CYP71A; cytochrome P450 family 71 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network