Detail information of g42434


Location
GeneChrStartEndStrand
g42434Scaffold_25624:HRSCAF_230575462257463318+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrTHU55121.11.4e-82hypothetical protein C4D60_Mb11t03240
SwissprotA2XW02.11.2e-72Receptor-like cytoplasmic kinase 154
trEMBLA0A8K0N7024.7e-85Salt tolerance receptor-like cytoplasmic kinase 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G33260.238.922e-62 236Protein kinase superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag156993.t1; g42434.t1; g58233.t1
Allium fistulosumAfisC2G05640; AfisC3G02399; AfisC3G06471; AfisC5G00132; AfisC7G04768; AfisC7G04776
Allium sativumAsa0G02495.1; Asa2G05435.1; Asa6G06875.1
Arabidopsis thalianaAT1G33260.1; AT1G33260.2; AT4G10390.1
Oryza sativaLOC_Os02g01730.1; LOC_Os02g43290.1; LOC_Os03g02190.1; LOC_Os04g45730.1; LOC_Os10g37190.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain54256125.03.1e-36

Gene Ontology
AccessionOntologyName
GO:0006950Presponse to stress
GO:0008150Pbiological_process
GO:0009611Presponse to wounding
GO:0050896Presponse to stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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