result

Gene information

Detail information of g42497

Location

Gene	Chr	Start	End	Strand
g42497	CHR3	10059957	10062239	-

Sequences

CDS

>g42497.t1
ATGACCGCCACCGTCTTCACCTCTGAATCCACTTACAAATTCCCGGTCTCCGACCCCGGCCGCCACTTCGTCCGCCTCCATTTCTACCCCACCCAGTACTCCACTCTCAACTCCTCCAGCTGCTTCTTCGACGTCACCGCCTCAGGCGGCGTAACCCTATTGAAGAACTTCAGCGCGTACATTACGGCTCAAGCCCTAACTCAAGCGTATCTCATCAAGGAATTTTCCCTCCCTCCTTCTCAGGACGGATTTATCACTCTCACTTTCACCCCCTCTAAAAATTACCAGGGATCGTACGCTTTCGTAAATGGGATTGAAATCATCTCCATGTCCGATATTTTTACGGAACCAGCCATCTTCGTCGGAAGCGATCAGACTGTAGATGTGAGCACCATGCCGATCCAGACAATGTTCAGACTCAACGTCGGAGGTCAGTACATTCCACCAACTAACGACACTGGTGCCATGTCTCGTACCTGGTACGACGATTCCCTTTATATTTATGGTGCCGCCACTGGGGTCACTTCTGGGCTGGGCCCTGGTGCCAAGCTCCATTACCCATCACCTGAATCCAAGCTCATTGCACCCGATGATGTGTACAGAACGGTCCGGACCATGGGGCCCGATAGCAAGGTCAATTTGAACTACAACCTCACCTGGAACTTTCAGGTGGACTTGAACTTCACCTACATGGTCAGGCTGCATTTCTGTGAAACTCAGGTAACTAAAGCGAACCAACGTGTCTTCGACATATTCGTTAACAACCAAACCGCAGAGTCAGGCGCCGATGTTATCGGTTGGGCCTCCGATAGAAACATACCCATTTACAAAGACTACACGACCTTTGTAACCAGCGATGTTTTATGGGTGGCACTGCACCCGAACAAGGATGCAAAGCCGGAGTTTTACGATTCTATACTGAATGGTTTGGAGGTGTTCAAGCTTGGTGATACAAATGCAAATTTAGCCGGGGCTAATCCGGTAATTTCACCAATGATGCTGGAAGCTGAACAAACTGCAGCAAGAGGGTTTGCACAGAAGGGGAGCAGTAAGGCGCACATTGTAGGAGGGGTGACAGGTGGTGCGGTTATGTTAGGGCTTGTTTGTGCTGTTTTCGTCATTGCCCATCAGAGGAAGAAACGGGTTTTGTCCAGCCCATCTACCCGTGGGTCGGGCTGGCTTCCTTTGTATGGAAATTCCTCTACTTCGGGAGGCAAGTCAACAGTTTCAGGCGGCACGAGCAGTCATGTTTCTATAATGGCAGCTGGATTATGCAAGCGCTTTTTTATATCAGATATCAGAGAAGGTACCAAAAACTTCGACGAATCAATGGTTATCGGAGTTGGAGGGTTCGGTAAAGTGTACAAAGGTGTAGTGGACGGAACTAAAGTTGCCATTAAAAGATCAAACCCTTCTTCAGAGCAAGGCGTGCATGAGTTTCAAACGGAGATCGAGATGCTTTCGAAGCTTCGGCACAGACACTTAGTGTCTCTGATCGGGTACTGCGAAGAGGAAGGTGAAATGTGCTTGATATATGATTACATGGCTTTAGGCACTCTTAGAGAGCACTTGTACAATACTAAGAAAGCAGCGCCTTTGCCATGGAAGCAAAGGCTTGAAATATCCATAGGAGCGGCCAGAGGTCTTCATTACCTACACACTGGAGCCAAGTACACCATCATTCATCGTGACGTGAAAACCACTAACATTTTGTTGGATGAGAAGTTTGTGGCCAAGGTTTCGGATTTCGGGCTGTCAAAGACGGGGCCCATGATGAACCAGACGCACGTGAGCACGGTGGTGAAAGGAAGTTTCGGGTATCTGGACCCGGAATACTTCAGAAGGCAGCAACTGACCGACAAGTCTGATGTGTATTCGTTTGGAGTTGTGCTGTTTGAGGTGATATGCGCACGACCCGCTTTGAACCCGAGTTTGCCAAAGGAGCAAGTGAGCTTAGCGGATTGGGCTTTGCATTGCTTACGGAAAGGGACTTTCAATGAGATAATCGACCCGGCGCTCAAAGGGAAGATAGACCCTGAGTGTATGAAGAAATTTGTGGAGACTGCAGAGAAATGTTTGAGTGATCATGGAGTTGATAGACCATCAATGGGAGACGTGTTATGGAATTTGGAGTTTGCATTGCAGTTGCAGGAAAATTTTGAGAATGAGATGAGTGAGAGCACGACGGGTTCTCATATCAGAACTGAAAGCAGCGGAGGGAGCGATACGAGTAATGATGCGGAGGGGATGACTAGCAATGCTATGTTTTCTCAAATATCTTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276464.1	0.0e+00	LOW QUALITY PROTEIN: receptor-like protein kinase ANXUR1
Swissprot	Q9SR05.1	6.1e-256	Receptor-like protein kinase ANXUR1
trEMBL	A0A835R2T3	6.1e-301	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04690.1	58.49	0.0	910	ANX1	Malectin/receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g42497	AT3G04690.1	766	284	14	1	753	78	822	58.49	910
g42497	AT5G28680.1	784	295	13	1	759	79	852	57.91	907
g42497	AT3G51550.1	808	303	16	1	759	89	889	55.57	854

Ortholog group

Species	Genes
Allium cepa	g196417.t1; g42497.t1; g539587.t1
Allium fistulosum	AfisC1G06412; AfisC2G03097; AfisC3G08832
Allium sativum	Asa2G07301.1; Asa2G07302.1; Asa5G02607.1; Asa7G00926.1; Asa7G03085.1
Arabidopsis thaliana	AT3G04690.1; AT3G51550.1; AT5G28680.1
Oryza sativa	LOC_Os01g56330.1; LOC_Os03g21540.1; LOC_Os05g20150.1; LOC_Os05g25350.1; LOC_Os05g25370.1; LOC_Os05g25450.1; LOC_Os05g25450.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12819.4	Malectin_like	Domain	8	314	102.0	3.3e-29
PF07714.14	Pkinase_Tyr	Domain	445	707	165.0	1.8e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0016020	C	membrane
GO:0005623	C	cell
GO:0016324	C	apical plasma membrane
GO:0030427	C	site of polarized growth
GO:0035838	C	growing cell tip
GO:0042995	C	cell projection
GO:0044425	C	membrane part
GO:0044459	C	plasma membrane part
GO:0044463	C	cell projection part
GO:0044464	C	cell part
GO:0045177	C	apical part of cell
GO:0051286	C	cell tip
GO:0071944	C	cell periphery
GO:0090404	C	pollen tube tip
GO:0090406	C	pollen tube
GO:0098590	C	plasma membrane region
GO:0120025
GO:0120038

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network