result

Gene information

Detail information of g426003


Location
GeneChrStartEndStrand
g426003Scaffold_79773:HRSCAF_462859186348187121-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF6164118.13.8e-28hypothetical protein GIB67_017702
SwissprotQ9LVW4.13.1e-27Protein PLANT GROWTH ACTIVATOR 37
trEMBLA0A7J7NB822.7e-28Transcription factor MYB98-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G27785.159.782e-29 125ATMYB118;MYB118;PGA37myb domain protein 118

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag115209.t1; g141972.t1; g395340.t1; g426003.t1; g471657.t1; g514873.t1; g61789.t1
Allium fistulosumAfisC3G04070; AfisC3G05329; AfisC4G04164; AfisC4G04166; AfisC4G04204; AfisC4G04211; AfisC4G04212; AfisC4G04213; AfisC6G05872; AfisC6G05891; AfisC6G05895; AfisC6G05896; AfisC6G05897; AfisC6G05910; AfisC6G05913; AfisC6G06039; AfisC6G06040; AfisC8G04156; AfisC8G04165; AfisC8G04193; AfisC8G04195; AfisC8G04325
Allium sativumAsa2G03130.1
Arabidopsis thalianaAT2G25230.1; AT4G18770.1; AT5G40430.1
Oryza sativaLOC_Os06g06740.1; LOC_Os12g07610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13921.3Myb_DNA-bind_6Domain10916663.51.4e-17

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0000988Ftranscription factor activity, protein binding
GO:0000989Ftranscription factor activity, transcription factor binding
GO:0001067Fregulatory region nucleic acid binding
GO:0001076Ftranscription factor activity, RNA polymerase II transcription factor binding
GO:0001134Ftranscription factor activity, transcription factor recruiting
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006109Pregulation of carbohydrate metabolic process
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0007275Pmulticellular organism development
GO:0009790Pembryo development
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009791Ppost-embryonic development
GO:0009793Pembryo development ending in seed dormancy
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009960Pendosperm development
GO:0009987Pcellular process
GO:0010154Pfruit development
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0010262Psomatic embryogenesis
GO:0010439Pregulation of glucosinolate biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010565Pregulation of cellular ketone metabolic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0010675Pregulation of cellular carbohydrate metabolic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0046889Ppositive regulation of lipid biosynthetic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0019216Pregulation of lipid metabolic process
GO:0019217Pregulation of fatty acid metabolic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0030154Pcell differentiation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0042304Pregulation of fatty acid biosynthetic process
GO:0042592Phomeostatic process
GO:0042762Pregulation of sulfur metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043255Pregulation of carbohydrate biosynthetic process
GO:0043455Pregulation of secondary metabolic process
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045723Ppositive regulation of fatty acid biosynthetic process
GO:0045834Ppositive regulation of lipid metabolic process
GO:0045923Ppositive regulation of fatty acid metabolic process
GO:0045995Pregulation of embryonic development
GO:0046890Pregulation of lipid biosynthetic process
GO:0050801Pion homeostasis
GO:0048316Pseed development
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048580Pregulation of post-embryonic development
GO:0048581Pnegative regulation of post-embryonic development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0048878Pchemical homeostasis
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051093Pnegative regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051241Pnegative regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0055081Panion homeostasis
GO:0055088Plipid homeostasis
GO:0055089Pfatty acid homeostasis
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0080050Pregulation of seed development
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1900376Pregulation of secondary metabolite biosynthetic process
GO:1901363Fheterocyclic compound binding
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:1904095Pnegative regulation of endosperm development
GO:2000014Pregulation of endosperm development
GO:2000026Pregulation of multicellular organismal development
GO:2000034Pregulation of seed maturation
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000241Pregulation of reproductive process
GO:2000242Pnegative regulation of reproductive process
GO:2000692Pnegative regulation of seed maturation
GO:2001141Pregulation of RNA biosynthetic process
GO:2001279Pregulation of unsaturated fatty acid biosynthetic process
GO:2001280Ppositive regulation of unsaturated fatty acid biosynthetic process
GO:0062012
GO:0062013
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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