result

Gene information

Detail information of g441268

Location

Gene	Chr	Start	End	Strand
g441268	Scaffold_81434:HRSCAF_464520	971483	974615	-

Sequences

CDS

>g441268.t1
ATGCTTGTCTTTTTCTCCAATAGAAAGGAAGGAAGGAAGGAAGAAAGAACTTCATCATCTATTCTATTAAGTACGGTTTCAATACTAAAGCTGGCATTAATTAAAAAAAGAAGGAAAAAGAAAAGAAGAAAACACTCAAACTGTTCAAACTTTGATATGAACTGCTGCCGTTTTGAATTTGGATTCAGAAGGAAAAGGGACATTTCACAGGCACTCGAGGGTTTCAAAAGCTCTTCATCCAGCAATAATGTTAAGCTTTTCTCTTATAAAGAAATGAAATCTGCAACAGATAATTTTCACCCAAAAAATAGGATTGGTCGAGGTGGTTTTGGAATTGTCTACAAGGGAACTCTAAAGGATGGAACATTAGTTGCAATAAAGAAGCTTTCTGCACAATCAAAACAAGGAGCGAAGGAGTTTTTGACTGAAATTGATATCATATCTAATGTTAAGCATCCTAACCTTGTTGAGTTGATTGGTTGCTGTCTTCATGAAAGTGAGCGAATATTAGTATATGAATATGTGGAGAATAGTAGCCTTGATCGAGCGTTACTAGGTCATAGAAGCACAAGCGCAAGGTTAGACTGGAGAGAAAGAGCTTCTATTTGTTTGGAGACAGCAAAAGGCCTCAGATTTCTACATGAAGAACACGAGCCATATATTGTCCACAGAGATATAAAAGCCAGCAATATCCTCCTTGACAAAAACTTCTTCCCAAAAATAGGAGATTTTGGATTGGCAAAGCTTTTTCCTGATAATATTACTCATATCAGCACAAGAGTCGCTGGCACAACTGGTTATTTGGCTCCTGAATATGCAATGCATGGACAGCTAACTAAAAAAGCCGACATATACAGCTTTGGGGTGGTTGTACTTGAAATCGTTAGTGGTAAAAGTGTATCAGATATACCAAGGTCGGAAATGGAGAAGTTTCTTTTGGAATGGGCATGGCAACTACGTGAAGAAGGGAGATTGAAAGAGATAGTGGATTCAAGTCTAGCAGAATACCCCGAAGAAGAAGTATTAAGATTTGCAAAAGTTGCACTCTTCTGCACTCAAGCAGCAGCTCAAAGAAGACCTTCAATGTCCCAAGTAGTTGAAATGTTGTCCAAACCAATACGACTGAACGAGAAAGAACTTACTCCTCCGGGCATTGTGCACATCTCCTCAGGAAAAGATAATTTTGGAAGGAAATCTAACTCTTCAAGTTTGAAATTTAAAGCCACAACTTTCACCAGCACTTCAAGTCATTTTAGCTCTGATGCCAATGTTACTTTTACTGATATTGTTCCTAGATGA

Protein

Gene

>g441268.t1
ATGCTTGTCTTTTTCTCCAATAGAAAGGAAGGAAGGAAGGAAGAAAGAACTTCATCATCTATTCTATTAAGTACGGTTTCAATGTAATTTGATTATCTACAGGTGAAGAAAAATTGAAGACTAAAGCTGGCATTAATTAAAAAAAGAAGGAAAAAGAAAAGAAGAAAACACTCAAACTGTTCAAACTTTGATATGAACTGCTGCCGTTTTGAATTTGGATTCAGAAGGAAAAGGGACATTTCACAGGCACTCGAGGGTTTCAAAAGTGAGAAATTGATTTTATTAAGTTCATTGTTTAATGTTTAATGCTAGTATCACAGCTTAAACATACATAATAAAGAAGATTATTTGCTTGGACAGTTAAAAATCATGTAATTATGCAGTTCTTTTAAAATTTTGAAATATAATTGTATCCTCCCGACCATAAGTGCAATGCATCATATATTTTGATTGTTTATTTTTCCATCTTCGAAGTTCTACATGCTGCAGCGGAATTCCTTGCAAACTTAATTACTTATTGTTATGGCTTTTCATTTTTCATGGTCTTGCTCAGGCTCTTCATCCAGCAATAATGTTAAGCTTTTCTCTTATAAAGAAATGAAATCTGCAACAGATAATTTTCACCCAAAAAATAGGATTGGTCGAGGTGGTTTTGGAATTGTCTACAAGGTAGGATATTATAGTGATATGACATCTGTCCCTGTTGACAAAGTCACAGGGACTTGTTTAATGCCAATTCCATTCTATTATTTGTTCTCTGTTTTAGGGAACTCTAAAGGATGGAACATTAGTTGCAATAAAGAAGCTTTCTGCACAATCAAAACAAGGAGCGAAGGAGTTTTTGACTGAAATTGATATCATATCTAATGTTAAGCATCCTAACCTTGTTGAGTTGATTGGTTGCTGTCTTCATGAAAGTGAGCGAATATTAGTATATGAATATGTGGAGAATAGTAGCCTTGATCGAGCGTTACTAGGTATGTTATAGTGCATGTTTTTACCATTGATTGTATTAGTAGTCAGCAATGACCAAACACTCAGGGTATCACTTTCAATCCTTCAAGGTTCCAATACCATAACCTTTGAAACTGATGAAACATACCAAGATGCTTCATTCTTAAGCTGAACTGACATGTTCTTTAACAACTATTCTAAAAAAACCAGAAATTTCATGACCGTTTTGAATTAGCACTTTTTGAAACTGAATCGAATTGGTTTTTGTAAGGTGTGAAATTTTATGTCTGACTCAACCATCCGTATTAAAGTATACCAAATCAAGGCGTGCAATTTTATTTCCCAGCAGGTTTTGATGTTATAAGATAGATATTATTATTTATACCAAGATATTGTTCAAAAGAATAAACCATTAAAAAGATGAGGATAAAGATTACAGTGTATGACCAAATTCCCTTGGGTGTTACAAGTTATAAACTATGTTAATTTCGTAGGTCATAGAAGCACAAGCGCAAGGTTAGACTGGAGAGAAAGAGCTTCTATTTGTTTGGAGACAGCAAAAGGCCTCAGATTTCTACATGAAGAACACGAGCCATATATTGTCCACAGAGATATAAAAGCCAGCAATATCCTCCTTGACAAAAACTTCTTCCCAAAAATAGGAGATTTTGGATTGGCAAAGCTTTTTCCTGATAATATTACTCATATCAGCACAAGAGTCGCTGGCACAACGTAAGCTTATCTTATCTTATCACTAGTAAAATTAAGTGTGGAACATTAATAACCAAAATTAGGGAAGAAAAAGAAAAAGAAATCCAGTCGAGAGTATCAGTGCTGCTAAGTTCTGGCCCATGCATCAGTGCATATACATTTTTCTTAACATACACATCTAAGATGGGATGTGTGAGTCATTGACTTGGTTCTGTAATGTTTCTTGCAATATATCTTATCTGAAGAGAGTTTGTAACATTCAGTAAAACTGAAACTAGTCATGTTATCTCTATAATGGTGTAATATAATCTTCTAACTTTACGGAACTGATGCGTCAATTCATCACGAAATTGCCAATTTGAGTGAGAAATGCATGGGTTCGGTATAATAGTCTGCTAAGAGATTTAGGTTAATGGGTTTGGTTAGAATTATTTATTTATTTTAAAAAATGTCTCCAACCATGAGGTTGTTTCATGCACAAGGGGCAGAACAGTAAAAATAATATCTCACAGTTACAACAATAATCACTACATGGTTTTGTGGTACATATTTCCCACAATAAGTACAACTGTGGAATTTCAAGCAGCATCATTATCTTAAAATGAATTGTGATGCCATTAGAATCTAATTTCATCGTTTAAGATTGCATTCTTAAGTACACTATATTGCAAAATTGTTAGGCTAATAATTGATTATCAATTTTGTAGTGGTTATTTGGCTCCTGAATATGCAATGCATGGACAGCTAACTAAAAAAGCCGACATATACAGCTTTGGGGTGGTTGTACTTGAAATCGTTAGTGGTAAAAGTGTATCAGATATACCAAGGTCGGAAATGGAGAAGTTTCTTTTGGAATGGGTAAGCTTATTAATCTATTATATTCGCCGAATTCACTTGTATATACTAGTACAGCCTTTCTCAGCTCATTCATCTAATAATGAATTGCTTTGTCCTGTGGGCTGGTGCTACTTGGGAATGCGTATGCATAGATGTTTTTTTTTTCTTTTTTCTTTTTCCTTTTTGCTTTTTTCACTTCATAAGAAAATCCTAAACAATAACTGTGCAGTTTGTTGATGATTTGCCATAAGTATTTATGTATTTACCTTTTCCAAAGGCATGGCAACTACGTGAAGAAGGGAGATTGAAAGAGATAGTGGATTCAAGTCTAGCAGAATACCCCGAAGAAGAAGTATTAAGATTTGCAAAAGTTGCACTCTTCTGCACTCAAGCAGCAGCTCAAAGAAGACCTTCAATGTCCCAAGTAGTTGAAATGTTGTCCAAACCAATACGACTGAACGAGAAAGAACTTACTCCTCCGGGCATTGTGCACATCTCCTCAGGAAAAGATAATTTTGGAAGGAAATCTAACTCTTCAAGTTTGAAATTTAAAGCCACAACTTTCACCAGCACTTCAAGTCATTTTAGCTCTGATGCCAATGTTACTTTTACTGATATTGTTCCTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263588.1	3.1e-159	putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	5.3e-95	Cold-responsive protein kinase 1
trEMBL	A0A5P1FAF9	2.3e-159	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G09010.1	64.15	5e-123	437		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g441268	AT3G09010.1	318	112	2	81	396	28	345	64.15	5e-123	437
g441268	AT1G16670.1	308	133	2	82	386	24	331	55.84	3e-100	362
g441268	AT1G56120.1	328	147	2	87	408	698	1023	52.74	2e-92	336

Ortholog group

Species	Genes
Allium cepa	g328438.t1; g441268.t1; g458501.t1
Allium fistulosum	AfisC1G02121; AfisC1G05591; AfisC2G06408
Allium sativum	Asa5G02282.1; Asa6G03836.1; Asa6G03837.1; Asa7G01724.1; Asa7G06560.1
Arabidopsis thaliana	AT3G09010.1
Oryza sativa	LOC_Os02g42620.1; LOC_Os03g15770.1; LOC_Os03g15770.2; LOC_Os03g15770.3; LOC_Os04g58250.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	100	367	172.2	1.2e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network