result

Gene information

Detail information of g444149

Location

Gene	Chr	Start	End	Strand
g444149	Scaffold_81745:HRSCAF_464831	225009	226998	+

Sequences

CDS

>g444149.t1
ATGTCAGAATCACCTCCGGCAAAAAAAATAAAGAAAACCGAAGATGATGTTATGGAACTGCTTACTAGGTACAGCACAACCACGATTCTATCTGTTCTTCATGAGATACATGAGTATACCTTGAATCATCCTGATTCTGTGGAGATAGATTGGGTACTACTATGTAAAAATACGTGTACTGGTATCTTGAATGCCCGGGAATATCAAATGCTATGGCGAAATTTAGCATATCAGGAGCCTTTAGTGGATGTTGAAGATGGAGCTGAGGTTATGGATGATAATAGTGATTTGGAAATAGAAATAGAAGCTGATCCACATCCAACTGCTGAAGAGGAATTCCATGCTAAGGAATGTGTCAAGGCATTACTTTCATCTTCTGCTCCTCGCTTATGCTCAGGAGATGAGGACATGCATAGTGGTTCACCATTACTTGATTCACCCGATAAGCAAGCTAGTCCAAACCGTGGAGGAAATGCACCAAACTCAAATTCAAGCAAAAAACCACCAACTGGGATTAGTGATGAAGGGACAGATGGAAATGGACTTCATAATGGCAAGAAGAAAAGGCAGCCTTGGACCAAAGAAGAAGACGAAGAATTAAAAGAAGCTGTGAAGAAATGCGGCGAAGGAAATTGGGTAAATATATTAAAAGGTGATTTTAAGCACAACAGAACTCCTTCTCAGCTACATCAGAGATGGAATCTTCTTCGGAAAAAAGATTGCAGCACAAACAATGGCAAAGGAGCTAAATGTAGCAGCTTGGCTACAAATGAGGAGAGGTTAGCAATGCAAAAAGCAATCAATATGGCCATTGATATGCCTATGACTGGAAGCATATCAGCGTATTCAGGGATGACACATACAGGCATATCTTCTACGTCAACAGCTGCGACTTCACAAGCGTCACGGGCATGTGCAGCTCAATCGTTAAGCCAATCACAAGACAAAATAACACCTAATATATTCACAAAACCTCGCCCGCTTATCAGAAAATCATCATTTCCTACAATGAAACATACAGCGGGGCCCAACCCTCTAATACAAGCTGCTGCCTTTGCTGCTGGGGGTCGCATTGCAAATCCTTCTACCGCTGCCTCACTCTTAAAGGCCGCACAGTCCAAAAATGCAGTTCGTATAGGACCTGGAGTTCAAATATGTACAAGTATACCTAATAACAGTAACAATAACAACAACAATAATAATAGCACTAGACCTTCTGCGAGTCAACCAATTCGACCTTCATCAACTCCAGGTTCATCTGGTTCAAGTTTTGGCACAACTTTGAGTTCCATAAAGTCAGTAGATTCCAAGGAAAAAGCAGCAGACAATGTTGAGGATAAAAAGATTTCTGCCAGTTATAACGGTAATTGTTGTCATGCAGAAGACTTGTTGAATGAGGAAAGAGTTGCTAAGGAGTCCAACGTAGGTGAAGCTAAGGTTGTGGTTGAAAAGGAAATCATAAGTCCCACTGATGCAACTAAAACCGAGGTTAAGAAGTCAAAAGAAAATAGAATTGAGAAGAGCAAGGAGACAGCTAATGCTGATAAAGTGAAAGGGTCAAACCCAAAAACTAATGTCACCGAAGATAGGCAGAGGCAGACGGCAGTCGATGAGAAGAAGTGA

Protein

Gene

>g444149.t1
ATGTCAGAATCACCTCCGGCAAAAAAAATAAAGAAAACCGAAGATGATGTTATGGAACTGCTTACTAGGTACAGCACAACCACGATTCTATCTGTTCTTCATGAGATACATGAGTATACCTTGAATCATCCTGATTCTGTGGAGATAGATTGGGTACTACTATGTAAAAATACGTGTACTGGTATCTTGAATGCCCGGGAATATCAAATGCTATGGCGAAATTTAGCATATCAGGAGCCTTTAGTGGATGTTGAAGATGGAGCTGAGGTTATGGATGATAATAGTGATTTGGAAATAGAAATAGAAGCTGATCCACATCCAACTGCTGAAGAGGAATTCCATGCTAAGGAATGTGTCAAGGTAAGGCCCATGTTCTTGGAATATCCTACCGTCAAACATGGACAATACCCATTTGTATGAGACTGGCAAATGTTTAGATAGTAAGTTTATTAGAAGTAGTTGAATCAGCTATTAAACAAAAAGAAACAGATTTGAAATTTTTTTGACCTCCTTTAAGGACCTGATTGCATCATAAACCTTACAGAAATGTTTGAATTGTTGATAGGTCATATACGTTATGCCCAAATGACATAAACACCTCCTTAAGGTGTATAGGTTGATATTTATCTCAATAAAATCTATTTTATATTCTTTATGAACTAATTGAGAAACGATACACCTTTCTTTACTGATATATAAACTGGTATTGTTTCAAAATAATGAGCAGGCATTACTTTCATCTTCTGCTCCTCGCTTATGCTCAGGAGATGAGGACATGCATAGTGGTTCACCATTACTTGATTCACCCGATAAGCAAGCTAGTCCAAACCGTGGAGGAAATGCACCAAACTCAAATTCAAGCAAAAAACCACCAACTGGGATTAGTGATGAAGGGACAGATGGAAATGGACTTCATAATGGCAAGAAGAAAAGGCAGCCTTGGACCAAAGAAGAAGACGAAGAATTAAAAGAAGCTGTGAAGAAATGCGGCGAAGGAAATTGGGTAAATATATTAAAAGGTGATTTTAAGCACAACAGAACTCCTTCTCAGCTACATCAGAGATGGAATCTTCTTCGGAAAAAAGATTGCAGCACAAACAATGGCAAAGGAGCTAAATGTAGCAGCTTGGCTACAAATGAGGAGAGGTTAGCAATGCAAAAAGCAATCAATATGGCCATTGATATGCCTATGACTGGAAGCATATCAGCGTATTCAGGGATGACACATACAGGCATATCTTCTACGTCAACAGCTGCGACTTCACAAGCGTCACGGGCATGTGCAGCTCAATCGTTAAGCCAATCACAAGACAAAATAACACCTAATATATTCACAAAACCTCGCCCGCTTATCAGAAAATCATCATTTCCTACAATGAAACATACAGCGGGGCCCAACCCTCTAATACAAGCTGCTGCCTTTGCTGCTGGGGGTCGCATTGCAAATCCTTCTACCGCTGCCTCACTCTTAAAGGCCGCACAGTCCAAAAATGCAGTTCGTATAGGACCTGGAGTTCAAATATGTACAAGTATACCTAATAACAGTAACAATAACAACAACAATAATAATAGCACTAGACCTTCTGCGAGTCAACCAATTCGACCTTCATCAACTCCAGGTTCATCTGGTTCAAGTTTTGGCACAACTTTGAGTTCCATAAAGTCAGTAGATTCCAAGGAAAAAGCAGCAGACAATGTTGAGGATAAAAAGATTTCTGCCAGTTATAACGGTAATTGTTGTCATGCAGAAGACTTGTTGAATGAGGAAAGAGTTGCTAAGGAGTCCAACGTAGGTGAAGCTAAGGTTGTGGTTGAAAAGGAAATCATAAGTCCCACTGATGCAACTAAAACCGAGGTTAAGAAGTCAAAAGAAAATAGAATTGAGAAGAGCAAGGAGACAGCTAATGCTGATAAAGTGAAAGGGTCAAACCCAAAAACTAATGTCACCGAAGATAGGCAGAGGCAGACGGCAGTCGATGAGAAGAAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245231.1	1.1e-89	uncharacterized protein LOC109823368
trEMBL	A0A5P1E711	8.1e-90	HTH myb-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09710.1	39.78	5e-45	179		Homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g444149	AT1G09710.1	274	139	7	13	271	17	279	39.78	5e-45	179
g444149	AT1G09710.2	274	139	7	13	271	17	279	39.78	6e-45	179
g444149	AT1G58220.1	275	142	8	13	271	15	274	37.09	2e-41	167

Ortholog group

Species	Genes
Allium cepa	g295470.t1; g444149.t1
Allium fistulosum	AfisC3G05238; AfisC4G00053
Allium sativum	Asa1G01185.1; Asa2G04349.1; Asa2G04358.1; Asa3G02166.1; Asa6G04425.1
Arabidopsis thaliana	AT1G09710.1; AT1G09710.2; AT1G58220.1
Oryza sativa	LOC_Os02g34630.1; LOC_Os02g34630.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	189	236	36.7	3.1e-09

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network