result

Gene information

Detail information of g459025


Location
GeneChrStartEndStrand
g459025CHR1225469894225480253-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_026393783.12.3e-209calcium-dependent protein kinase 28-like
SwissprotQ9FKW4.11.1e-203Calcium-dependent protein kinase 28
trEMBLA0A4Y7K3301.7e-209Calcium-dependent protein kinase 28-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G17890.174.370.0 743CPK16calcium-dependent protein kinase 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag189007.t1; g459025.t1; g529819.t1
Allium fistulosumAfisC1G02577; AfisC2G05735; AfisC4G01898; AfisC4G05468
Allium sativumAsa4G01634.1; Asa6G03150.1; Asa6G03162.1; Asa7G02420.1; Asa7G05423.1
Arabidopsis thalianaAT2G17890.1; AT4G36070.1; AT4G36070.2; AT5G66210.1; AT5G66210.2; AT5G66210.3; AT5G66210.4
Oryza sativaLOC_Os02g03410.1; LOC_Os02g03410.2; LOC_Os07g22710.1; LOC_Os07g22710.2; LOC_Os07g22710.3; LOC_Os07g22710.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain53311236.62.8e-70
PF13499.3EF-hand_7Domain35842039.74.6e-10
PF13499.3EF-hand_7Domain43849239.94e-10

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0002831Pregulation of response to biotic stimulus
GO:0002832Pnegative regulation of response to biotic stimulus
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0006952Pdefense response
GO:0050832Pdefense response to fungus
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004683Fcalmodulin-dependent protein kinase activity
GO:0004721Fphosphoprotein phosphatase activity
GO:0004722Fprotein serine/threonine phosphatase activity
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005488Fbinding
GO:0005516Fcalmodulin binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006470Pprotein dephosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006950Presponse to stress
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009620Presponse to fungus
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009755Phormone-mediated signaling pathway
GO:0009931Fcalcium-dependent protein serine/threonine kinase activity
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010857Fcalcium-dependent protein kinase activity
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016311Pdephosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0016787Fhydrolase activity
GO:0016788Fhydrolase activity, acting on ester bonds
GO:0016791Fphosphatase activity
GO:0018105Ppeptidyl-serine phosphorylation
GO:0018193Ppeptidyl-amino acid modification
GO:0018209Ppeptidyl-serine modification
GO:0019538Pprotein metabolic process
GO:0022603Pregulation of anatomical structure morphogenesis
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031347Pregulation of defense response
GO:0031348Pnegative regulation of defense response
GO:0032101Pregulation of response to external stimulus
GO:0032102Pnegative regulation of response to external stimulus
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0036211Pprotein modification process
GO:0042221Presponse to chemical
GO:0042578Fphosphoric ester hydrolase activity
GO:0043170Pmacromolecule metabolic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0043900Pregulation of multi-organism process
GO:0043901Pnegative regulation of multi-organism process
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0046777Pprotein autophosphorylation
GO:0048519Pnegative regulation of biological process
GO:0048583Pregulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0048831Pregulation of shoot system development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051239Pregulation of multicellular organismal process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060688Pregulation of morphogenesis of a branching structure
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:0080134Pregulation of response to stress
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:0098542Pdefense response to other organism
GO:1900424Pregulation of defense response to bacterium
GO:1900425Pnegative regulation of defense response to bacterium
GO:1900618Pregulation of shoot system morphogenesis
GO:1901564Porganonitrogen compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:2000026Pregulation of multicellular organismal development
GO:2000032Pregulation of secondary shoot formation
GO:0140096
GO:1905428

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13412CPK; calcium-dependent protein kinaseEC:2.7.11.1 Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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