Detail information of g471657


Location
GeneChrStartEndStrand
g471657CHR8166561802166571369-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK79403.12.2e-39uncharacterized protein A4U43_C01F6000
SwissprotQ9S7L2.11.2e-18Myb-related protein 98
trEMBLA0A5P1FNV71.6e-39Transcription factor MYB98-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G18770.157.298e-22 102AtMYB98;MYB98myb domain protein 98

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag115209.t1; g141972.t1; g395340.t1; g426003.t1; g471657.t1; g514873.t1; g61789.t1
Allium fistulosumAfisC3G04070; AfisC3G05329; AfisC4G04164; AfisC4G04166; AfisC4G04204; AfisC4G04211; AfisC4G04212; AfisC4G04213; AfisC6G05872; AfisC6G05891; AfisC6G05895; AfisC6G05896; AfisC6G05897; AfisC6G05910; AfisC6G05913; AfisC6G06039; AfisC6G06040; AfisC8G04156; AfisC8G04165; AfisC8G04193; AfisC8G04195; AfisC8G04325
Allium sativumAsa2G03130.1
Arabidopsis thalianaAT2G25230.1; AT4G18770.1; AT5G40430.1
Oryza sativaLOC_Os06g06740.1; LOC_Os12g07610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain19123758.35.4e-16

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0000988Ftranscription factor activity, protein binding
GO:0000989Ftranscription factor activity, transcription factor binding
GO:0001067Fregulatory region nucleic acid binding
GO:0001076Ftranscription factor activity, RNA polymerase II transcription factor binding
GO:0001134Ftranscription factor activity, transcription factor recruiting
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006935Pchemotaxis
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009553Pembryo sac development
GO:0009605Presponse to external stimulus
GO:0009856Ppollination
GO:0009889Pregulation of biosynthetic process
GO:0010183Ppollen tube guidance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0040011Plocomotion
GO:0042221Presponse to chemical
GO:0042330Ptaxis
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0044706Pmulti-multicellular organism process
GO:0045595Pregulation of cell differentiation
GO:0045691Pregulation of embryo sac central cell differentiation
GO:0045697Pregulation of synergid differentiation
GO:0048229Pgametophyte development
GO:0048856Panatomical structure development
GO:0048868Ppollen tube development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0050918Ppositive chemotaxis
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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