result

Gene information

Detail information of g479451

Location

Gene	Chr	Start	End	Strand
g479451	Scaffold_85496:HRSCAF_468582	424426	426494	-

Sequences

CDS

Protein

Gene

>g479451.t1
ATGAAAACCCTAAAACCTACGTCTTCGTCTTCCGAGGAAGAAATGTTCTGTTCATCAGACGAAGAACCACCCTCTCAAGAAAAGCTACAAACAAACGAACGAACTTCCAATTCCGAGTCTGAAGAATCTGAATATGAGTCGAGTGAAGAAGAAAGCGATGAATCGGGTGATCTAGTGCCTAAATCTGTTGTCCCAGTATCAGGCGGTTCATCTAAAAAAAGCGATTCAAAAAGAAAGAAAACCGCTGATAATGTTTCACAAAATGAAAAAGGCAAGAGAAAGTGCAAATCTTATGATTTGAAGTCCAAGGGACTGCAATTGGCATCTTCTTCCAGAGGCGGTTCCACTAAAAAAGTCGATTCGAAAGGAAAGAAAACCGCTGATAATGTTTCCCAAAACGTAAAAGGCAAGAAAAAACTCAAATCCCATGATTTGAAATCCAAGACACTGCAAGTGGCATCTTCTTCCAGAAGCTCTCTCAAAGCAAAAGGAGACGGTGAAATTTCCAAGAGACATCGTTTTCCAAGACTTTGGTCCTTGAAGGATGAGATAACACTACTAATTTCCTTACATGAGTTCCAATTGAAGGAGGGAAGAGGTGTAGGTCCTTCCTCAATAGAACTATTCTGTGATTTATTGAAGGGTAGGATAAGTTTCACTGAGAGGCCAAGCGGTGACCAGGTATCCAAAAAAATGAGAGATTTGAAAAAGAAATATTTTCGTACTGTGAAGTCTTTTACAGCTGAACATGACTTGAAAATGAAAGAGATCGCTGATAGAGTATGGAAGAGAAAGTCTTCAAAGATAAAGTCTTCAAAAGGAAAGTTTCCACTACTGAAGATGGAACTACGGAAATTGGATCTTCATGATTTAGAAAAAGAACTCAAGTCTGAAGAAAAAGCAGCAGCTTTAGAAAACAAACTGAAACTGCGAAGAATAGACAATATGAAGTTGACTCTGAAAAGGTTGGCACTGGAAAAGGAGATCTTAAAGTTTTACTTGGAGGATTTTCGAAAGTCAGATAATTAGGCATGATAACGCGTGATATCCCTTGATTAAAATTTTTATGTTTCTTTTATTAAGAGACGCAGATGTCTAATTTCTGGTTTGCTTATGTTATGCATGCTTCTTTTGTGTGCAAGAAAGAGAATGGTAGGAAAAGGTAGCTTGAAGGAAGATGGTATATTTTATATCAAAAGTTTTGCACGATTCAAGAAACTAATGCACTCGGTACTTCTTGTGGATAGATATTACTTGTAAATTTTTGGTATTTTGTGCGATTAGACACCAATTAAGCACTTTTTAAGTATTTTCCTTCAAATGATTTTTGTGTTTAGGATTCAAATTTGTGGCAATATAAGACTTCACATGAATTATGGCATTGATTGATGACTTAATTTACAATGAAAATTAACTTATGTTCATACTTCATAGTAAATGTGATATTAAATGCAGTATCTTTTAAAGCATAAAACTGGTTACACAAAGTAGGTTTTCTTTCTTATAAAACTAATTACACAACAACTAGATTGGCATTTAGATTCTAAACCTGAAATATCAATTGTGGTTGTTTATATTTTGTGTTTGGATTGACAATCAGATTAAAAAGTTGTAAATGTCAATTGAGTTGGTTTAATATATATTTTTATAAGAAATATTGCACTTCAACTAGTTTTGGTCTTTTAGTATGTGTAGAACCACTGATTTGTATATGCTAGGCTATATGCGTGTGTCGTAGGAAGTTTTCATTGATTTAAAATCAAACTTATGCTTATAACTTTAATACTGCCTTCATTCTTTACTTGCTGCTGCTGATTTTCAAGAATAGAACGTATCTTATATGAAACTCATCTTATCATGTACATGTTTATGCTCATTAAAGCGAGTTCTATGAACTTGAGAATACAAGCAGTATATCTCCAAGTGTCATGTACAGACTAGTTTCGATATAGTGTTAAGTTAGTTTCGCAAAGTGCTTGATGGAAATCCTGATATTTCTAACGTTTTCTTTCTTTCTTAGATGTGAAGCAGGAATCGAAAAGATGGAGCTTGAAAACAAATATGTTTAA

Functional annotation

Database	accession number	e-value	annotation
-	-	-	-

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G61730.1	33.60	1e-07	53.9		DNA-binding storekeeper protein-related transcriptional regulator

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g479451	AT1G61730.1	125	75	4	153	272	133	254	33.60	1e-07	53.9
g479451	AT4G00610.1	103	61	4	161	262	135	233	35.92	4e-07	52.4
g479451	AT1G11510.1	110	59	3	161	262	125	228	33.64	2e-06	50.4

Ortholog group

Species	Genes
Allium cepa	g100352.t1; g293260.t1; g307365.t1; g413482.t1; g428003.t1; g433991.t1; g433999.t1; g434000.t1; g479451.t1
Allium fistulosum	AfisC1G05575; AfisC1G06898; AfisC2G08602; AfisC4G00114; AfisC4G02714; AfisC6G02770; AfisC6G03336; AfisC6G06890; AfisC6G06898; AfisC6G06900; AfisC6G06908; AfisC6G06909; AfisC6G06910; AfisC6G06911; AfisC7G01218; AfisC8G05944; AfisC8G05945
Allium sativum	Asa3G01886.1; Asa8G00091.1; Asa8G00092.1; Asa8G00801.1
Arabidopsis thaliana
Oryza sativa	LOC_Os02g53150.1; LOC_Os06g30250.1; LOC_Os09g01140.1; LOC_Os09g03990.1; LOC_Os10g09910.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04504.11	DUF573	Family	174	262	49.7	3.9e-13

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network