result

Gene information

Detail information of g483489

Location

Gene	Chr	Start	End	Strand
g483489	Scaffold_86018:HRSCAF_469104	632276	635096	-

Sequences

CDS

>g483489.t1
ATGAAAATATTACTATTAATACTGCTGAATCATTTTCTCATGGCAGCTAAAGCAGATTTAATTGAAGCTGGATCAGTTTGCAATGAAACATGTGGCAAATTTTCTATCGAATACCCATTTGGAATTCGTGAAGGATGCTATCGTGATGGCTTTAATATTTCTTGCAATCATACCGATGTTATCTCCAAACCATACCTTTTCAATACTGAGATTATTGGTATTTCAGTTCTCCCACCTCAAATTCGCGTCTACAATTGGATTAGTTATGCTTGCTATAACATCAGTGGATTGCCTGACCGCGCTGGAACATATTATTTGAATTTCAGAGACACAATATATCGGTTTTCAGATATTCATAATAAATTTACAGTTATCGGATGCAAAACTCTTGCATATATTCAAGATTATTCTGATGAAAGTGATCCATATATGAGCGGCTGTTTATCAATATGCAGTAGAAACAGCAGTGCCATGGATAAGGCTCCATGTTCAGGAATGGGTTGCTGCCAAACTTCAATTCCAAAAGGTATGACTTACTACGATACAAAATTCGATGATGGGTTTAATCACAGCAGTGTTGTGGATTTTAGTCCATGTAGCTATGCGTTTCTTGGCGATCAGGACTACATTTTCAATTCATCGGATGTTCATATGGATGAGTTTAGCAAAAGGAATAAGAAAGGCGTGCCTATTACGCTTGATTGGGCTGTTGGAAACAGTAATTGTACGGAGTCAGTTCATAATAAGGATTATGCTTGTCGTAGTGAGCACAGCAATTGTGTGGATTCTGTTAACGGACCAGGTTATACTTGCAATTGTTCGATTGGTTTCCAAGGAAATCCATATACACTAGGAGGATGCAGTGATATCAATGAATGTAGAAACAAGACACATAATAACTGCTATGGAGAATGTCATAATGTCGTGGGAAGTTTTACGTGTAAATGCCCATCTGGACATGAAGGAGACCCTTTTCAGCAAGGAGGTTGCCGACCAAAACCCAAATTGTTGCTACAACTGCTACTTATAGGTGCACTTAGCATTTTCTTGATCGCTGCTGTTATTTATCTTGTATATGAAAAGACAAAATTGAGCAGAGCTAAACGAAATTGTTTTAGACAAAATGGAGGTCTACTATTGCAAGAACAAATCAGTGCACATCAATGTGTACGGTTCAAAATATTTCCTGCAGAAGAAATAAACAGAGCTACAAACAGCTTTCATGAAGCTCAAATTGTTGGACGTGGGGGCCAAGGCATTGTCTACGAAGGAATTCTCGATGATAAGAGAAGGGTTGCCATTAAAAAGTCACTAATGATAGACGAGAAGAAAAAGAAAGAGTTTGCCAAGGAAATGTACATACTTTCTCTCATCAATCATAAAAATGTGATTCAAATTTTGGGCTGTTGCTTGGAGGTTGATGTCCCTATGTTAGTGTATGAGTTCATATCAAGAGGCACGCTTTACCAACTTATTCATAATAAAAATCAGTCCATGTCGTATAGTTTACGACTGAAAATAGCTGCAGAATCTGCATCAGCGCTTGCATATCTACATTCAGATGCTTTCCCTTCAATTGTTCATGGCGATATAAAGTCTTCGAACATTTTACTTGATGATGACTATAATGCAAAAGTTTCTGATTTTGGTGCTTCATTTTTGCCTCTAAATTATGTAAATGAAACCGGTGTACCTGGTACTTATGGTTATTTGGATCCAGAGAGCCTACAAACTGGTCAACTGACTGAAAAAAGCGATGTTTATAGCTTTGCAGTTGTAGTTTTAGAGCTTCTTACAAGGAAAAAGGCAGTTTATACAGATGCGCTAGGTGAAAAAAAGAATCTTGCACAAACATTCATAGTTCAAGGTCTCGAAAAAATATTAGATAAAGAAATCAAGAATGAAATGAGCCGGAAGCAAATTATAGAATTCGAGGGATTGTTGAGATTGAGTTTAAGAGAAGTTGGAGAAGAAAGACCCACTATGACTCAAGTGGTGGCATTTCTTCGAAGAATGAAGGATTCCAATAGCTCAGTGTTAGGGGAAAGCAACTTTGAATATGCAAAGTACATGGATGGTGAATCGGGTTTGGATACACCTTATACCACATCCACATCTTCTTCTGCATTTTGTAGTTTAGATAGTCGAGCAGCTTTTCAATTTGATTCTAAGCTTACTAGATAG

Protein

Gene

>g483489.t1
ATGAAAATATTACTATTAATACTGCTGAATCATTTTCTCATGGCAGCTAAAGCAGATTTAATTGAAGCTGGATCAGTTTGCAATGAAACATGTGGCAAATTTTCTATCGAATACCCATTTGGAATTCGTGAAGGATGCTATCGTGATGGCTTTAATATTTCTTGCAATCATACCGATGTTATCTCCAAACCATACCTTTTCAATACTGAGATTATTGGTATTTCAGTTCTCCCACCTCAAATTCGCGTCTACAATTGGATTAGTTATGCTTGCTATAACATCAGTGGATTGCCTGACCGCGCTGGAACATATTATTTGAATTTCAGAGACACAATATATCGGTTTTCAGATATTCATAATAAATTTACAGTTATCGGATGCAAAACTCTTGCATATATTCAAGATTATTCTGATGAAAGTGATCCATATATGAGCGGCTGTTTATCAATATGCAGTAGAAACAGCAGTGCCATGGATAAGGCTCCATGTTCAGGAATGGGTTGCTGCCAAACTTCAATTCCAAAAGGTATGACTTACTACGATACAAAATTCGATGATGGGTTTAATCACAGCAGTGTTGTGGATTTTAGTCCATGTAGCTATGCGTTTCTTGGCGATCAGGACTACATTTTCAATTCATCGGATGTTCATATGGATGAGTTTAGCAAAAGGAATAAGAAAGGCGTGCCTATTACGCTTGATTGGGCTGTTGGAAACAGTAATTGTACGGAGTCAGTTCATAATAAGGATTATGCTTGTCGTAGTGAGCACAGCAATTGTGTGGATTCTGTTAACGGACCAGGTTATACTTGCAATTGTTCGATTGGTTTCCAAGGAAATCCATATACACTAGGAGGATGCAGTGGTTAGTTTTATCCCTTTGACCTATCTTATCTTATTATAAGAGAATTAATTAGAAACAAAAATCATGCTCTTGTAAAATTAGCAAAGATGACCATTTTAATGTGAATATGGATATGAATGCTTGAATTTAAGAAGTTCAAATAGTTTGATATATAAGTTGAAAATCATTGCTGCTTTAAAGATTTATCTAATGCCTGTTGCAGCATGTGGGTTTATAAATAAAATTATCTGTTAACCCTCACCGTAATTTGTTTAACTACGTTTATACAATTTGTTTGATTATGTTACGAACCCAAATGGACTGTTAAACTAAACTGGTAACCGATCATTTATGTGAATAATTGGCAAAACAGATATCAATGAATGTAGAAACAAGACACATAATAACTGCTATGGAGAATGTCATAATGTCGTGGGAAGTTTTACGTGTAAATGCCCATCTGGACATGAAGGAGACCCTTTTCAGCAAGGAGGTTGCCGACCAAAACCCAAATTGTTGCTACAACTGCTACTTATAGGTATTTTTTCTAGCTAAACTAAATTGATCCTATATTTTCTATGTTAATAATGTAAAACTGAAAATAACCAAAAGTGAATTATGAAATCAAATGATCCATATCAATGGATGCATTTTAGTACTTTAAAACAGTAACAAGGCTCAAATGCATCAATTGATCATGATCAGATACTTCAGAATTCAGATACATTGTTTTTTACAAGAAAGTATTTGTTCTTAGCAAGAGTTGCAAAATATATATGAACACTTCTAAATAACTTAACTTTCTTTATTTTTTAATGTGTAGGTGCACTTAGCATTTTCTTGATCGCTGCTGTTATTTATCTTGTATATGAAAAGACAAAATTGAGCAGAGCTAAACGAAATTGTTTTAGACAAAATGGAGGTCTACTATTGCAAGAACAAATCAGTGCACATCAATGTGTACGGTTCAAAATATTTCCTGCAGAAGAAATAAACAGAGCTACAAACAGCTTTCATGAAGCTCAAATTGTTGGACGTGGGGGCCAAGGCATTGTCTACGAAGGAATTCTCGATGATAAGAGAAGGGTTGCCATTAAAAAGTCACTAATGATAGACGAGAAGAAAAAGAAAGAGTTTGCCAAGGAAATGTACATACTTTCTCTCATCAATCATAAAAATGTGATTCAAATTTTGGGCTGTTGCTTGGAGGTTGATGTCCCTATGTTAGTGTATGAGTTCATATCAAGAGGCACGCTTTACCAACTTATTCATAATAAAAATCAGTCCATGTCGTATAGTTTACGACTGAAAATAGCTGCAGAATCTGCATCAGCGCTTGCATATCTACATTCAGATGCTTTCCCTTCAATTGTTCATGGCGATATAAAGTCTTCGAACATTTTACTTGATGATGACTATAATGCAAAAGTTTCTGATTTTGGTGCTTCATTTTTGCCTCTAAATTATGTAAATGAAACCGGTGTACCTGGTACTTATGGTTATTTGGATCCAGAGAGCCTACAAACTGGTCAACTGACTGAAAAAAGCGATGTTTATAGCTTTGCAGTTGTAGTTTTAGAGCTTCTTACAAGGAAAAAGGCAGTTTATACAGATGCGCTAGGTGAAAAAAAGAATCTTGCACAAACATTCATAGTTCAAGGTCTCGAAAAAATATTAGATAAAGAAATCAAGAATGAAATGAGCCGGAAGCAAATTATAGAATTCGAGGGATTGTTGAGATTGAGTTTAAGAGAAGTTGGAGAAGAAAGACCCACTATGACTCAAGTGGTGGCATTTCTTCGAAGAATGAAGGATTCCAATAGCTCAGTGTTAGGGGAAAGCAACTTTGAATATGCAAAGTACATGGATGGTGAATCGGGTTTGGATACACCTTATACCACATCCACATCTTCTTCTGCATTTTGTAGTTTAGATAGTCGAGCAGCTTTTCAATTTGATTCTAAGCTTACTAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026657217.1	1.0e-162	LOW QUALITY PROTEIN: putative wall-associated receptor kinase-like 16, partial
Swissprot	Q9LMP1.1	4.7e-104	Wall-associated receptor kinase 2
trEMBL	A0A8B7CMA2	1.2e-157	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	39.61	3e-123	439	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g483489	AT1G21270.1	669	363	20	27	673	29	678	39.61	3e-123	439
g483489	AT1G21230.1	701	380	22	1	673	1	682	39.09	1e-118	424
g483489	AT1G21240.1	687	351	26	27	673	31	689	39.01	2e-115	413

Ortholog group

Species	Genes
Allium cepa	g456466.t1; g483485.t1; g483489.t1
Allium fistulosum	AfisC1G04919; AfisC1G07355; AfisC1G07356; AfisC2G05419; AfisC3G03929; AfisC3G06081; AfisC3G08024; AfisC3G08039; AfisC3G08840; AfisC4G06007; AfisC6G06463; AfisC8G00200; AfisC8G04787
Allium sativum	Asa7G00218.1; Asa7G06017.1; Asa7G06032.1; Asa7G06040.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	26	129	88.5	4.1e-25
PF07645.12	EGF_CA	Domain	289	321	27.4	2.6e-06
PF00069.22	Pkinase	Domain	407	666	145.2	2e-42

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network