result

Gene information

Detail information of g486177

Location

Gene	Chr	Start	End	Strand
g486177	Scaffold_86383:HRSCAF_469469	71902	72277	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAF6150781.1	4.9e-20	hypothetical protein GIB67_020864
Swissprot	A2XE31.1	6.9e-19	Two-component response regulator ORR21
trEMBL	A0A7J7M7B4	3.5e-20	Two-component response regulator

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G67710.1	70.31	3e-21	96.7	ARR11	response regulator 11

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g136838.t1; g338175.t1; g486177.t1
Allium fistulosum	AfisC2G09615; AfisC5G05714
Allium sativum	Asa0G03192.1; Asa0G04793.1; Asa2G00056.1; Asa3G01992.1; Asa3G01993.1; Asa5G01050.1; Asa7G03386.1
Arabidopsis thaliana	AT2G25180.1; AT4G31920.1
Oryza sativa	LOC_Os02g08500.1; LOC_Os02g55320.1; LOC_Os06g08440.1; LOC_Os10g32600.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	28	92	41.8	9.1e-11

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14491	ARR-B; two-component response regulator ARR-B family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network