result

Gene information

Detail information of g48622

Location

Gene	Chr	Start	End	Strand
g48622	CHR2	73392993	73410573	-

Sequences

CDS

>g48622.t1
ATGACTAACAGTGTGGGAAGCAAATTTCCGGCAAGCAAGATTAAAGAACAGGTGGTCAAAGAATACAGACAATCCGAGCGGGCAATCATACTCGAAAAACTAGACAGTTATGTAAATATTTGCATGCAACTTAAGATACAAGCTGAGAAACTAGTGATTGATTCAGATAATGTTGCAAAAGGACTTGTTGAGCTTATATCTCTGCACGGGATTGAGAGGCTTGTTATGGGAGCAGCAGCAGACAAGTATTTTTCCAGAAAAATGAAAACGCCGAAATCACAGACTGCAATTACAGTGAGACAGCAAGCAAACTCATCGTGTCAGATATGGTTTGTTTGCAAAGGAAACCTCATTTGCACAAGGGAATTTTCACATGACACGAAGTCTATGGGAACACCATCACCAGCATTGAGCCTAAGCACGCCTTCCTCGTTCCGTTCAGTTCAGTTGAGATCAAGATCAATGCCTGAAATCCATCTGCAGGTGCCTACTCCGGAGTTACCAAGCCAAATGTCACTACCGAATTCATCTCGAACTACCGCATCAATTTCTCAAAGCAGGATGATCTTGCAGACTTCTCTGGTCACTGATCCTGGAGATGAGACCTCTGAAGGTTTCCAGAGCTCGAGTAGTACATTTTCTTCCATTACGAACGATATGTTTAGCAATTTAAATACAATGTCTGTTGCAAAGTCTGGAGAGAGTGAAGAGGGATTAGTGATGCTACCCCTAACAGAACATTCTATTGAAGATGCTAGTATTGTATCTTCTCAAAATGATATGGATAATGATATAGATGCAGAAGTTTATAGTAGACTTCAAGAAGCTTACCTGGAAGCAGAAAAATCAGATCGTAAAGCTCATCAAGAATCAATCAAACGTCAAAAAGCCGAAAGAGATGTTATAGAAGCTCTCAGACGAGCTAAAACATTTGAGGTGTTATACGCTAAAGAAATGGAAAGAAGAAAAGAAGTCGAGGCATCACTTGCAAGAGAAACAATGGAAGTAGAACTTCTCAAAAATCAGAGTAGCAAAACCTTCGAACAACTACAAACTGCAAACGATCAAAAGTTAGAACTAGAACTCAAAATTGCTGATTCCACTAAGGAACTTGTTGAAGTTAAACTTCTCCATAGTAAACTAAAAGCAGAATATGAAGAACTGGAGTTGGAAAGAGATGCAATACTTGAAGAAGTAGGTCGAACCAAAGAGGCAGCAGGCATAAACAGTACAAACATACATAACTTTACTGAATTTTCATTGTTGGAAATTGAAACGGCGACGTGTAACTTTAGTGATTCACTTAAGATTGGTGAAGGAGGATATGGAAATGTTTATAAAGGTTTGCTTCGGAATACGACTGTTGCTATAAAGGTATTGAATCCTGATAGCATGCAGGGCATATCAGAGTTTCATCATGAGGTATATGTTCTTTCTAGAGTGAGACATCCGAACCTTATAACCTTAATAGGGGTATGCATCGAACTCTCTGCCCTTATATACGAATATCTTCCAAACGGATCCCTAGAAGATCACCTCAACCACAACACCTCCCCTCTCCCGTGGCAACCACGTACACGTATCCTCACTGAGATATGCTCCGCCCTACTCTTCCTCCACTCAAACAAACCCCACACGATCGTGCATGGAGACCTAAAACCCGAAAACGTCCTTCTAGACCACACCCTCATGGCCAAACTAGGAGACTTCGGCATTTGCCGTCTATTGACCCAATCCACGACCTCGCATACTCTTTGCCACTACACCCTTCCTAAGGGCACTTTCGTGTACATGGACCCCGAGTACCTGGCCACAGGAGAGCTTACCCCAAAGTCCGATGTGTACTCCTTCGGTGTTGTCATGCTGAGGATTCTGACGGGTAGACAACCGTTTGGGATCGTTAAAGAAGTGAAGAACGCTTTGGATAGAAACACGTTGCATGAGTTGATCGATGGTGGTGCTGGAGAGTGGCCTTACGTGCAAGCTAAGCGGTTGGCGGAGTTAGGGGTGTGGTGTTGTGAGGTTGCTAGGAGGAAACGGCCAGATTTAGGAGATGTTTGGAGAGTTCTTGAGCCTATGACGAGGATTACGACTTCCTCGTTTGTGTATGAAGATGATGTTCCAAGCTACTTCATCTGTCCAATATTTCAGGAGATCATGAGGGATCCACATATCGCTTCGGATGGATTCACGTACGAGGCAGAGGCTTTGAAGGGATGGATAGAAAGCGGGCGTGATACATCTCCCATGACTAATTTAAGTCTACTGAATTATGATCTTATTCCTAATAGAGCTCTTAGATCTGCAATTCAGGAGTGGATGCAAAAGCATGCAATGTTGTGA

Protein

Gene

>g48622.t1
ATGACTAACAGTGGTAAAGTAAAAAAAGATGAAAAATTAGATTGCTCATTTAGAATACTAGAAAAGAACAAGATACTGTGAACTCAGTGATTTTATTCTTTTGTAATACCTCTTTTTTTTCATTAAAAAAAAAAAATCTTTGATCAACAGTGGGAAGCAAATTTCCGGCAAGCAAGATTAAAGAACAGGTGGTCAAAGAATACAGACAATCCGAGCGGGCAATCATACTCGAAAAACTAGACAGTTATGTAAATATTTGCATGCAACTTAAGGTGAAGTAACATCATAATTGTTAAATTAGTTTTGATTGATTGTGCTGTTTTTACTTCATTTAGTTTCTTTATTCAGATACAAGCTGAGAAACTAGTGATTGATTCAGATAATGTTGCAAAAGGACTTGTTGAGCTTATATCTCTGCACGGGATTGAGAGGCTTGTTATGGGAGCAGCAGCAGACAAGTATTTTTCCAGGTTCAAATTTTATTTTAATTATCAATTCTGCTTTTTATTAAAAGAAATAAAAATCATTAGTTCCATGTTTTATCAGCATAATTCATATTTCAGAAAAATGAAAACGCCGAAATCACAGACTGCAATTACAGTGAGACAGCAAGCAAACTCATCGTGTCAGATATGGTTTGTTTGCAAAGGAAACCTCATTTGCACAAGGTAAAATTCACTTACAGAGTAGATACACACATTTGCATTTTTTATAATTTGATACAGCTGTGTACATTTTTTGTAACAAGAATGCTAGCCTCTCACTCTTCTTAAGAAATAAGAGATTCACAATTTTGATGATTAGTGGACACAATGTTTTGAATTTATAAATGGTCATTTTTTGGGTAACACTGTTCATTCCAACAATAATAAAGCATTTGTCATAGACATGTACAACCTTTTTGTTATATTTGGCTATAATGTTTATTGTGTTGTATGCCTTGGTAGCGTACATTTTTACTGCACTTTTTTAAAATCAGTTAAACGCCAAATTTTTTAGTGAATACATACCTCACAATATATACTTATTGTAATTTAAAGTGATTTATTGTTGTTGTTGTGCACTGCAAATATATGCAGTCCGGCTGAAACTAAAAACATGAGTTACCTTGAAAGGGGTTTTATGAAATCCTGGAAAGGAGTTTTTCAAGCAGTATAACGTCATTTCTCAAGATTTTAGCCAGATGAGCTACCTTGAATGTTGTTTTTCCATTGCAATTGTAGTGCAATAAATGTGATGTTCACAACTTCAATAGGGAATTTTCACATGACACGAAGTCTATGGGAACACCATCACCAGCATTGAGCCTAAGCACGCCTTCCTCGTTCCGTTCAGTTCAGTTGAGATCAAGATCAATGCCTGAAATCCATCTGCAGGTGCCTACTCCGGAGTTACCAAGCCAAATGTCACTACCGAATTCATCTCGAACTACCGCATCAATTTCTCAAAGCAGGATGATCTTGCAGACTTCTCTGGTCACTGATCCTGGAGATGAGACCTCTGAAGGTTTCCAGAGCTCGAGTAGTACATTTTCTTCCATTACGAACGATATGTTTAGCAATTTAAATACAATGTCTGTTGCAAAGTCTGGAGAGAGTGAAGAGGGATTAGTGATGCTACCCCTAACAGAACATTCTATTGAAGATGCTAGTATTGTATCTTCTCAAAATGATATGGTGGGTGCTTCTGCACTAGTATTTACTTGTATTTTGGTTCTTCTTGCACTTCTCGTGAAATAATCTATTAACCTATACCATTCACAAGCACATATATGCATATGCATGTATGCATGTGCAGAGATTGATACATGTATATTTGGGTTTGGTAAAGGTTTCAATAGCTAGAAGTAGAAACCAAATTATCTTTTTGATATTGTTACATTTACGACTGTCAATAGGTATAAGCAGAGTCAGATGATGCTTTATTCATATCTGAATCCGAAAAGCAAAATTCGTATTCGGTAGTTGGAGATATCTGAAAACTTATAACCATATACACATTTGCGGTATTCGGATATCCCAAAATATTTATACCTGAAAATTCAAAATGACGATAATCTAAGAAATGATCCGCAGAGCAGTTATATTCACATAAAAACACAGTTTTCTTTTTGCATAAAAACCATCGTTTTGACATATAATTGAATATTTTTGTATGAAAATACAGTTAAATCATCTGAAAATTACATTTTATCATATAAATATCGAAGTTTCCATAAATATGTTGTTCTTATGCAGAAATTGCAGTTAATTTTATGAAAAAGCTGTCTTTTTGCATAAAATAGTTGCAAATTTGTACTTGACAGACTTTTTCCAGATGTGTATACCATTAGATTCACATCCATAACTGAAAATTTATTTGGATATCAAATATCCATATTTGCTTTCCAGACTTTTGATAATTTTTATATTTTCAAACACGAATGCTTAATCTGATTCGAATTTCCATCATTTTGGTAAATTAGTTTTCACGCTAATTATTAAGAAGTTTCTTATGTAAGTTTTTTGTGCTATCAAGGTTGCTGAAATCAAGTTGTTAAACCTGAAAGTAACTATTCTAAATTATCATTTTGGTTATTTTCAAAAATATTAATGGATCAGATACTATGTAGGATAATGATATAGATGCAGAAGTTTATAGTAGACTTCAAGAAGCTTACCTGGAAGCAGAAAAATCAGATCGTAAAGCTCATCAAGAATCAATCAAACGTCAAAAAGCCGAAAGAGATGTTATAGAAGCTCTCAGACGAGTAAGTCTCTCGAAAAAAATTCTACTACTCTTTTTGTTCATATGGTTGCATGTAACTAGTTATCTGAATTATCAGTTGTGACCTTAATATGAAAGTTATAACTAACTGACTTGCATATATTAGGCACATATTTTGTTTAATTATAATATATTAGTGTTGTAACTCTTATAAAAAATAACAATGACAGAAGTTATAGCGCAATCACTAGTTACAATATTACTTTACAGGCTAAAACATTTGAGGTGTTATACGCTAAAGAAATGGAAAGAAGAAAAGAAGTCGAGGCATCACTTGCAAGAGAAACAATGGAAGTAGAACTTCTCAAAAATCAGAGTAGCAAAACCTTCGAACAACTACAAACTGCAAACGATCAAAAGTTAGAACTAGAACTCAAAATTGCTGATTCCACTAAGGAACTTGTTGAAGTTAAACTTCTCCATAGTAAACTAAAAGCAGAATATGAAGAACTGGAGTTGGAAAGAGATGCAATACTTGAAGAAGTAGGTCGAACCAAAGAGGCAGCAGGCATAAACAGTACAAACATACATAACTTTACTGAATTTTCATTGTTGGAAATTGAAACGGCGACGTGTAACTTTAGTGATTCACTTAAGATTGGTGAAGGAGGATATGGAAATGTTTATAAAGGTTTGCTTCGGAATACGACTGTTGCTATAAAGGTATTGAATCCTGATAGCATGCAGGGCATATCAGAGTTTCATCATGAGGTTAGCAAAATTTATGTTGTGCCTTGGTTCATTTATTTGATTTGAACTTTTACAAACTAATACAATATGATCACAGTTTCTCAGAAAAAAATATACTGAATCTCAGTTATACCCTTGTAGAACTAATAACTGAGAGAGTGAATCACTTATTAACTCATGTTTATGTGCTTCAATGTAGGTCTATCAACAGATACTTTCGGATGCTGATAATACCATTTCCGCATTCAAAATCATTTTCGAATATTGAATATCTGCGTTCGCGGATAGGACAGATATCAGATAATTGTCTTATCCGCTAATGATCGATAAATCAAAAAACATAAATAGAAAATTTTAGTTTAAAATAATTTTTTTTCAATCTCATTGATCATAAAAGTGTCAAAATAAACAAATATGATTATAATAAATAGTTTTGAACAGTTAATATGCATTAAGTACATATAATATAAACTACTAATTTAATAAAGCAATAAATAAATATCTTTTATTATACTAAAGTATACATAATTTAAACTATAATCTTAACAATAACCGTATGGATAATTTTTGGATGCACATGTCTTTATATCCGCATCTGCATCCGTTTTTCGGAATATCAGATATTTATCCGCTTTGAGGATAGGAATGCGGGTGGATTTTTCGGATATCCATTGACAACAATACTTCAATGCTTGATTTGTCTAGTGCTTGTTGCACTATCATAGTTAGAGCAACCCATATCTTTGTTAAAGCAAAGAGCGGATCCATTTTAAATATAGGTTTCTGCAAAAAAAATTATTTCAAACCTTATCCAAAACTTATTATGAAAATAAGTTGTTTTTTCGTTTTTATACATGCACATTTCACAATGCGCACATATAACTTTTGATTTTATACATGTGCATTCTGAAAATGCGCATGTACAAAAATGAAATACTTTTTCCATAATAAGTTTTTGATGAAACCTATTTGTAAAATAAGATTTCTTTACTGAGGCTTACTTTTGTAATCTACTCGCATAGAGATTCTTCTGTGCAAACATAGGAACTACCCAAGACTCAAAAGTTAATGGTACAAGGTATAGAACTCAGTTAACAAAAAGAAAACTTATTTAAGGATTATCATTGACAGTATCGGCTTGGCAAGCACGCTGCTTAGATTATAAGCAAAACCAAATTTCTTGTATGTTTTATCACAGGTTTTGCCAGTATTTGATCCATCTGCCAAAAGTTGCGTTAAATTTTGGGAAAAAAATATATATTTAGGGATTTCCACTGACAAACTCGGCTTGGCTAGAGAATGGCATTAACTATGAGCACAGATCCAATGTTTTTGTTATATTCTATCAATATTATTACCTATGTTTGCCTGGTAACCAAAGAAAAAAAAATGTCATTGGCAAATAGATTTATTAGCCTTTGGACAAAATTTGGAAACTTATTTCAGTTTTAGAGCAATTTCGAAACTATTTACAAATATGTCACGTCTCTATGAGACGAAAATGCATGTTGGCACTATCTGGAATCGCGGCTATGCATTGCTGTCGTTTCAATTATGTGGCAAAAAGATGTGTGTGTGTAGTTTTGAAACTGATCTAAAATTGACATTACTTTTGATAATGATCTTTTTTAATAAATTTTCCCTGTCAAATTGTTTACTGACAACCTTTTTTTATTGATTTTTTTCTCTCAACGTACCAGGTATATGTTCTTTCTAGAGTGAGACATCCGAACCTTATAACCTTAATAGGGGTATGCATCGAACTCTCTGCCCTTATATACGAATATCTTCCAAACGGATCCCTAGAAGATCACCTCAACCACAACACCTCCCCTCTCCCGTGGCAACCACGTACACGTATCCTCACTGAGATATGCTCCGCCCTACTCTTCCTCCACTCAAACAAACCCCACACGATCGTGCATGGAGACCTAAAACCCGAAAACGTCCTTCTAGACCACACCCTCATGGCCAAACTAGGAGACTTCGGCATTTGCCGTCTATTGACCCAATCCACGACCTCGCATACTCTTTGCCACTACACCCTTCCTAAGGGCACTTTCGTGTACATGGACCCCGAGTACCTGGCCACAGGAGAGCTTACCCCAAAGTCCGATGTGTACTCCTTCGGTGTTGTCATGCTGAGGATTCTGACGGGTAGACAACCGTTTGGGATCGTTAAAGAAGTGAAGAACGCTTTGGATAGAAACACGTTGCATGAGTTGATCGATGGTGGTGCTGGAGAGTGGCCTTACGTGCAAGCTAAGCGGTTGGCGGAGTTAGGGGTGTGGTGTTGTGAGGTTGCTAGGAGGAAACGGCCAGATTTAGGAGATGTTTGGAGAGTTCTTGAGCCTATGACGAGGATTACGACTTCCTCGTTTGTGTATGAAGATGATGTTCCAAGCTACTTCATCTGTCCAATATTTCAGGTATTTATGCAGTTCATTTACCCTTCTTTTCTAAATGTATCCGGTAATATGTCCAGCGCCGCTTTCCTAGTGGTTAGATGGCTATGGTCCATGATGTCATAGGTTCGCATCCTGTGATTCGAACCACTAGTTATTGTTGACTTGCAGACAATCTGATTATATGCATACACACATAAATGCACCTCCATTTGGCTACACCTCTAACCCTTGCTCTACGCAGAGAGATAGAGGGGGGGGGGGGGGGGGGTACATTGTTTTGAGCTTAGGCCAAGGCCCCACATGAAATTTTTTAATTTTTTCTTTTATAAAAATCAACTTACAAGTTTTAGCCCCAGCTGGATTCAAAAATTGTGCCCTACGTAAACTAAGTGTTGCTATGTTGGCTCATTTTATTTTCCTAGTTCTATATATCTTAGGTCTGCATAAAAAAAGTTTCAGAGTATTAAACTATTATTCTAGTCCATTTTAATATTTCGGTATATTACCTATCACTTGAAAAATATTTCAGTACCGGTATGTAATCTTTTTTGTATTTTCATGTCCAGTTGTGCTATGATTGACAGGTACTTGGTATATTATGTGGTATATTCGAATAATAACATTGTTTAAAAAACTATAGAATCCAGAAAATCTGATTTGTAACATAAGCTAACTCCTTTTTTGGTAGCAGATACTTAGATATAGGTAAAAATTTCTGTAAACCATGTATAAGAATATTTTTAGATGGAAACTTCGTAAATTTTGTTAAATAATAAAAGTATCCAAGTATTACAAGAAACTAACATTTCAAGTTGTTTTTTTTTGTTCCAAAGGAATCAAAATTTACACAAAAAAAGAAACATTTTTCAAATAAATCCTCAGTGCTATGGTTTGCAATTTTATAATAGATTGTTGTATGTGATGTCCGCCCTATCTAACTTTGCAGGCTAACTCCGCCACTCTGTGTTTGTACATATACACACTTACAATCAGTGTGTGTATCATGTGTGTGTGTTGGACGTACCAACTCATAATACATATACACACTCACACACACATGTGTGTGTAATGTGTGTGTGTGTTAGATGTACCAACTCCATAATACATATTTCAAAATGTTTAATGGGGATCTACCGTGGCATGTTTTGAACTTTTTGGGACATTTTGATATTTTTCAAGAAGTTTCAATATGAACTTCTTTTTTTTAATTATGTGCAGGAGATCATGAGGGATCCACATATCGCTTCGGATGGATTCACGTACGAGGCAGAGGCTTTGAAGGGATGGATAGAAAGCGGGCGTGATACATCTCCCATGACTAATTTAAGTCTACTGAATTATGATCTTATTCCTAATAGAGCTCTTAGATCTGCAATTCAGGAGTGGATGCAAAAGCATGCAATGTTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008804030.1	6.6e-216	U-box domain-containing protein 33-like
Swissprot	Q8GUH1.2	5.5e-151	Serine/threonine-protein kinase
trEMBL	A0A8B7CQB5	4.7e-216	U-box domain-containing protein 33-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G45910.1	45.51	0.0	639		U-box domain-containing protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g48622	AT2G45910.1	791	367	12	5	777	89	833	45.51	0.0	639
g48622	AT3G49060.1	798	434	15	8	776	62	804	35.09	6e-120	428
g48622	AT3G49060.2	804	422	17	8	776	62	794	34.33	3e-115	413

Ortholog group

Species	Genes
Allium cepa	g48614.t1; g48622.t1
Allium fistulosum	AfisC4G03682; AfisC4G03684
Allium sativum	Asa4G02866.1; Asa4G02887.1
Arabidopsis thaliana	AT2G45910.1
Oryza sativa	LOC_Os09g39640.1; LOC_Os10g40100.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	434	682	156.2	9e-46
PF04564.12	U-box	Domain	707	777	66.6	1.5e-18

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0016567	P	protein ubiquitination
GO:0006464	P	cellular protein modification process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016740	F	transferase activity
GO:0019538	P	protein metabolic process
GO:0019787	F	ubiquitin-like protein transferase activity
GO:0032446	P	protein modification by small protein conjugation
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0070647	P	protein modification by small protein conjugation or removal
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09553	STIP1; stress-induced-phosphoprotein 1	EC:-	-	-
K11838	USP7, UBP15; ubiquitin carboxyl-terminal hydrolase 7	EC:3.4.19.12	FoxO signaling pathway	ko04068

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network