result

Gene information

Detail information of g501365

Location

Gene	Chr	Start	End	Strand
g501365	Scaffold_88353:HRSCAF_471439	142447	145680	-

Sequences

CDS

Protein

Gene

>g501365.t1
ATGTCTGCCATATGCAGTAAAAGAACCCGGCCTAATAAACCGTCCGTTAATCTAGACGAAGCCGATGACGTAAAATGTGAAACATGCAACTCCGGCCACCGAGCCGCCGAGCTCCTCCTCTGTGACGCCTGCGATTCTGGTTATCACCTCTTTTGCCTTCGGCCCATCTTACCACGTGTACCTGCAGGATACTGGTTCTGTCCGTCTTGCTCTATTCTCAAAAACCCTAACAGTAAGATTCTTTTTTATTTTTTATAGATCAGATTTTAGTGTAGTTGGATCTTTATTAATCTATTCTTTGTTTTTGAAGAAAAATCACCGCGAGAAATCAAAGCTATTGACAAACCCAATCGTAAGTGTATAAAAACGTGAACTTTTCTTCAAATATGATTTCAGGGTCAATTTTATTCGCATCTAGATACTCATTTATTTATTTATTTTGGTGCAGAAATTCAACTCGTGCAGACAAAAATAGATGATTTTTTCAAGATCCGGAGGTATAATGATGATAACTCGTGGATTAAGAAGAAGAAGAAGAGAAATGTCGGGTTGAGAGTGACGCCAAAGAGGAGGAGCAAGTTGCTTGCTTTTATTCCAAGCGAGGATACCGAGAGAAGAATAGAGCAAATGCGTTCGCTTGCTGATGCTTTGATGAGCAGTGGAGCTCAGTTTAGCAACGATCTTACTTACGTTTCTGGCATGGCTCCTAGATCTGCTAATTGTGCCTATTTAGAACGAGAAGGAATGCAGGTAATTTTACTCAAGACGTTGACTTTTTGTTTTTCTTTAAAAGGTAATTCTGTTTTGATTATTTTCGTTGTTTGCTGTTATGGTAGATAATGGCAAAAGGTGATGTTGAAACATTGAATTCGTGTAAGAAGATGATGGAGAGAGGAGAGTGCCCTCCTTTAATGGTGGTTTATGATCCAGTTGAAGGGTGAGTTTTTATATGAAATTTATAATGATTTTTATTGTGTATATCATGGATCTATATTTCTCCATACTAAGTACACGGTATTTCCCACACCATATTTTACACCAAAAACCACCGATTTTAACAACTAGTTATCTTAATAATACCAAGTTCATTACCCGAACAGTTTATGCATGCTGTTTGTGTATTACTTTCAATACTTCTTGTTGTTTGAAATTGAGTTTTCGAACCATATATAAATTAGATTGTAATTTTGCCTTTTTTCCAGTCTGCAAGCTACGGTCTTTCAATTTGGTATATGTGGGAAGTTTAACATATTATTTGGTGTTGGGTATATATGGTGCCATTCTAATATACCCTGTTGCATTTTGATTAATCCTATTCATTGTTTTAAAAACTGCCTTGATATTTGTCTCTAGGAGTGGATGAAACGAGAGATCAAACATCTTAAGTCTTTCTTTAAAAGGCTTTTTTTATCTCTAAAGCTTACTCCTTAGCATAAGTTATGCAAAATATACAAAGTGTATGCCTTACACATCTCAAATTGCCGAGGCATGTGAAATACACAAAGTGCATTTAATGAAAAACGAAAAAGAACAAAATTTAAGAAAATGAGTTGGTGTTTTTTTACTTTTTAATTTTAATATCGATATAATTAAATAAGACTGATTTGAAACAATGATAAAAAACTATATAATGAATTCTAATTGCTATTTTTAAAAAAATTCTTACTAGATTTCATTGAATCACCAAATGAATTTTGTAAATCGATTTGAATTGGTTGAAGGAATCAAAATTGGAATTTTGCCAATCTTCATATAAATTTTGCTGAATCAAAACTGGAATCATATGTATTTCATTTATTTAGTTTTGATCGAGTTAGACCTTAATGATTTGTTCGGATAGTTTAAAATGTTAAATTTAAGTATATTTTTACGTTTTATTTTTATGTTAAAAGCTTACGTCTCAATGTTTCAAGGCTTAGGCCTCCCTCATAGACTTGAAAGCGCATCATGTATCCTTTCATGTTTTAAAACAATTAATCTATTATAATCCGTTAAATTTCTTTTGCCATTCCACTACTTGTGGAAAATTTGTGCCTTTTGTACTTCACTCCTTTGTTAGCCTTGTCTTGTTGGAGTGTTGCGTCCTTTCTTCTTCAACTTGAGCATTGCTATTGTTTCTTAGCACTTGGCAAACTAGTTTTTCATCAATTCCTAGAGCGAACCCCTAGATATTTATCAATTTTTAGTTTGCATCACGCCAAGTTCGTTCAAGTTAGTGTCATTTTTGATCAAATTTTATCGCATAGCATATTTGCTTTCAGTAAATTCACAAAGATTCTCATCCTCAAAGAGCATCATCTTTTGCATTCTCTTCAAAGAAATAGCAGAAAATCTAAAGGTATATGTTCAAAGAAATAAATTTTGTTAAGGAATTTAACAAAAATATTAGGGGTTAAACCTAAAGTTTTATATCTCTTCCATCTTGCTTGATATTTTACCTGAACTCTCTTTTTGGTATTTGAAGTTGAAATAAAATTCCAACTTAATTTGAATTTTTTTGACATTCATCTCGTGGCATGTCAAGATATTTGCTTTAAACATGGATCCAAATGTCAATTTGATGTTTTACTTGAAATCCGAAGTTTAAAAGTTTGGAGTTTAAGCTGGTGTTATGTTGTTAGAATAAGGTTCTATTAGACTTTTAGATGAATTTTTAATACTAGAACTGCTACTCTTACAAAAGAACTACATGTTCCACATTGAACTTCACGAATGATTTTGAATTGATCTTTTTTCTACTTGTGTATTTTCTGTATTTGCTGGTACTTAAATATGTATGTTGATCCAAACAGGTACACAGTGCAAGCAGATCGGTTCATTAAAGACTTAACAATAATTACAGAATATGTAGGAGATGTTGATTACTTGAGTAACAGAGAAAATGATGATGGTGATAGCATGATGACTCTGTTAACAGCAAAAGATCCCTCAAAGAGTCTGGTTATTTGTCCAGACAAGCGCAGCAACATTGCCAGATTCATAAATGGAATCAACAACCATACCCCGTAAGCATTTTTATTCAAAATTTAAACTTCAAATTTGAATTGATTGCTAATGATAATTTTGGTAATCAGGGAAGGGAAGAGAAAGCAGAATGTAAAATGCGTGAGGTTCAGCGTGAATGGAGAGGCGAGGGTTTTATTGATTGCTATTAGAGATATTAAAATGGGAGAGAGGCTGTATTATGATTACAACGGATATGAACATGAATATCCTACCGAACATTTTGTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_019189085.1	6.9e-125	PREDICTED: histone-lysine N-methyltransferase ATXR6-like
Swissprot	Q9FNE9.1	5.0e-112	Trithorax-related protein 6
trEMBL	A0A5D2ZSV9	8.5e-125	Histone-lysine N-methyltransferase ATXR6

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24330.1	64.74	9e-120	426	ATXR6;SDG34	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g501365	AT5G24330.1	329	97	4	26	349	35	349	64.74	9e-120	426
g501365	AT5G09790.2	333	122	3	23	349	64	379	56.46	6e-106	380
g501365	AT5G09790.1	327	106	3	23	349	64	352	55.96	4e-101	364

Ortholog group

Species	Genes
Allium cepa	g289192.t1; g501365.t1
Allium fistulosum	AfisC3G06558; AfisC5G00957
Allium sativum	Asa2G05496.1; Asa6G06398.1
Arabidopsis thaliana	AT5G09790.1; AT5G09790.2; AT5G24330.1
Oryza sativa	LOC_Os01g73460.1; LOC_Os02g03030.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00628.26	PHD	Domain	26	71	40.6	1.6e-10
PF00856.25	SET	Family	260	337	22.2	0.00013

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0051276	P	chromosome organization
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0003824	F	catalytic activity
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006275	P	regulation of DNA replication
GO:0016570	P	histone modification
GO:0006325	P	chromatin organization
GO:0006464	P	cellular protein modification process
GO:0006479	P	protein methylation
GO:0006807	P	nitrogen compound metabolic process
GO:0006996	P	organelle organization
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0008168	F	methyltransferase activity
GO:0008170	F	N-methyltransferase activity
GO:0008213	P	protein alkylation
GO:0008276	F	protein methyltransferase activity
GO:0008757	F	S-adenosylmethionine-dependent methyltransferase activity
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0009900	P	dehiscence
GO:0009901	P	anther dehiscence
GO:0009908	P	flower development
GO:0009987	P	cellular process
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0016043	P	cellular component organization
GO:0016278	F	lysine N-methyltransferase activity
GO:0016279	F	protein-lysine N-methyltransferase activity
GO:0016569	P	covalent chromatin modification
GO:0016571	P	histone methylation
GO:0016740	F	transferase activity
GO:0016741	F	transferase activity, transferring one-carbon groups
GO:0018022	P	peptidyl-lysine methylation
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0018193	P	peptidyl-amino acid modification
GO:0018205	P	peptidyl-lysine modification
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0022414	P	reproductive process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032259	P	methylation
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032504	P	multicellular organism reproduction
GO:0034968	P	histone lysine methylation
GO:0036211	P	protein modification process
GO:0042054	F	histone methyltransferase activity
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0043414	P	macromolecule methylation
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0046976	F	histone methyltransferase activity (H3-K27 specific)
GO:0048367	P	shoot system development
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048443	P	stamen development
GO:0048466	P	androecium development
GO:0048608	P	reproductive structure development
GO:0048609	P	multicellular organismal reproductive process
GO:0048653	P	anther development
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051052	P	regulation of DNA metabolic process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0070734	P	histone H3-K27 methylation
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0080090	P	regulation of primary metabolic process
GO:0090567	P	reproductive shoot system development
GO:0099402	P	plant organ development
GO:1901564	P	organonitrogen compound metabolic process
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network