Detail information of g505856
| Gene | Chr | Start | End | Strand |
|---|
| g505856 | Scaffold_88931:HRSCAF_472017 | 966058 | 971151 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020249491.1 | 2.6e-259 | helicase SEN1-like |
| Swissprot | Q00416.2 | 2.3e-47 | tRNA-splicing endonuclease positive effector |
| trEMBL | A0A6P5ER60 | 7.6e-237 | uncharacterized protein LOC109707103 isoform X1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT1G65810.2 | 39.82 | 7e-166 | 582 | | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g505856 | AT5G37150.1 | 874 | 450 | 22 | 269 | 1118 | 1 | 819 | 39.47 | 4e-166 | 582 |
| g505856 | AT1G65810.2 | 889 | 461 | 18 | 277 | 1138 | 22 | 863 | 39.82 | 7e-166 | 582 |
| g505856 | AT1G65810.1 | 889 | 461 | 18 | 277 | 1138 | 22 | 863 | 39.82 | 1e-165 | 581 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00226.28 | DnaJ | Domain | 85 | 141 | 40.3 | 2.4e-10 |
| PF13086.3 | AAA_11 | Domain | 509 | 871 | 140.4 | 7.8e-41 |
| PF13087.3 | AAA_12 | Domain | 879 | 1075 | 202.5 | 4.8e-60 |
| PF00642.21 | zf-CCCH | Family | 1146 | 1169 | 22.2 | 9e-05 |
| PF00642.21 | zf-CCCH | Family | 1197 | 1220 | 28.8 | 7.3e-07 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K10706 | SETX, ALS4; senataxin | EC:3.6.4.- | - | - |