result

Gene information

Detail information of g508350

Location

Gene	Chr	Start	End	Strand
g508350	Scaffold_89148:HRSCAF_472234	141019	142684	+

Sequences

CDS

>g508350.t1
ATGTCAGAATCATTTTTAATGGTGATAGCAGTGCTGTCTTCAATAGAAATGAAGCTTATTTCATCCCTCTTTTTCTCTTTCACAACCCTCTTCATCGTCTTCTCCATCATTCTCTTCCTCATAAAGCAACTCAAAGCACCTTACTACTGCAACTGCAGCATATGCGAATCCTACGTGAACTCTTCATGGAAATCCGAATTCAAAAACTTGCAAGATTGCCAACCCACTGAACGTGGAACACATGCTCAGAACCAACTTCGACAACTACCCCAAGGCCTCGAACTCGGCAGCGTTTCTGTCCACCTGTACGCCTTCTCCATCACGCTTAATGAAGTATCCACTAGACTTTGTCCTCTGCTGTCCTCCATGGCAGGGTCGAACAAGGTCTTCGATCTGCAGGATGTGTTTAGAAGGTTCTCGTTCGATGCTATTTGTAGGATCTCGTTTGGGGTCGACCCTGGTTGTCTCACGCTCTCCCTGCCCACGTCTGAGTTCGCCGCCGCGTTCGACCTGGCCTCTTCGCTGTCTGCAAAACGGGCGCTGGCCGTGAACCCCGTCCTCTGGAAGGTGAAAAGGCTCCTGAATATAGGATCAGAAAAGGAGTTGAGGAGAGCAATCTCGCTCGTAGATGCCCTTGCCGGTGAGGTGATCAAAAAAAGGAGGGACCGTGGTCACGATCAGGACGATCTGCTGTCTAGGTTCATGGGGAGCGTGACGGACGACAGGTACTTGCGGGACATCGTGATAAGTTTCCTACTGGCGGGGAGGGACACGGTGGCATCGGGTCTGACGGCGTGCTTCTTCCTGTTATCGAAAAACCCAGGCGTCGTGGCGAGGATGAGGAAGGAGATCGACGGAGTCGACTTGAAAAACGTGAGCTACGAGCAGATACGGTCAATGGGATTCGTGCATGCCACACTATACGAGAGCATGCGGCTGTACCCGCCGATACAGTTTGACTCCAAGCACTGTTTGGAGGATGATGTTATGCCGGACGGGACGTGCGTGACGGGGGGCACGAGAGTGACGTACAACCCCTACGCAATGGGCCGGATGGAACGGATCTGGGGGATGGACTGGGCCGAGTTCAGGCCCGAAAGGTGGTTGAACGAGAAGGGTGGTTTTCAGATGGAGAATGCATACAGATACCCTGTGTTTCAAGGGGGAGCACGCACCTGTATTGGGAAAGAGATGTCTGTAATGGAGATGAAGACGGTTATTGTTTCGGTGGTTGGCGAATATGATTTGGAGGTTGTGGATGGTGGGGATTCTTTGGTTTTTGCGCCGGGGCTCACTGCAACCGTTAGCGGTGGGATGAGGGTCGTTTTGGTTCGGTTCAATTGGTGGATGATGGATTATTTTTGGGTGGGCCGGGTTTGTTTGATGTTTTTGATCTATGATTCTTTTTCCGCTGATGCGACCATCTCTGTTGTACATAAAAAAAAGGGAAATTGA

Protein

Gene

>g508350.t1
ATGTCAGAATCATTTTTAATGGTGATAGCAGTGCTGTCTTCAATAGAAATGAAGCTTATTTCATCCCTCTTTTTCTCTTTCACAACCCTCTTCATCGTCTTCTCCATCATTCTCTTCCTCATAAAGCAACTCAAAGCACCTTACTACTGCAACTGCAGCATATGCGAATCCTACGTGAACTCTTCATGGAAATCCGAATTCAAAAACTTGCAAGATTGGTACTCACATCTACTCTCTATCTCTCCTACCCAAACAATTCATATTCACGTCCTCAACAACGTAATCACAGCCAACCCACTGAACGTGGAACACATGCTCAGAACCAACTTCGACAACTACCCCAAGGGTAAGCCCTTTTCCTCCATTTTGGGCGACTTGCTCGGAAAGGGCATATTCAACGTGGACGGCGAGCCGTGGCGGTTCCAGCGTAAGATGGCCAGCCTCGAACTCGGCAGCGTTTCTGTCCACCTGTACGCCTTCTCCATCACGCTTAATGAAGTATCCACTAGACTTTGTCCTCTGCTGTCCTCCATGGCAGGGTCGAACAAGGTCTTCGATCTGCAGGATGTGTTTAGAAGGTTCTCGTTCGATGCTATTTGTAGGATCTCGTTTGGGGTCGACCCTGGTTGTCTCACGCTCTCCCTGCCCACGTCTGAGTTCGCCGCCGCGTTCGACCTGGCCTCTTCGCTGTCTGCAAAACGGGCGCTGGCCGTGAACCCCGTCCTCTGGAAGGTGAAAAGGCTCCTGAATATAGGATCAGAAAAGGAGTTGAGGAGAGCAATCTCGCTCGTAGATGCCCTTGCCGGTGAGGTGATCAAAAAAAGGAGGGACCGTGGTCACGATCAGGACGATCTGCTGTCTAGGTTCATGGGGAGCGTGACGGACGACAGGTACTTGCGGGACATCGTGATAAGTTTCCTACTGGCGGGGAGGGACACGGTGGCATCGGGTCTGACGGCGTGCTTCTTCCTGTTATCGAAAAACCCAGGCGTCGTGGCGAGGATGAGGAAGGAGATCGACGGAGTCGACTTGAAAAACGTGAGCTACGAGCAGATACGGTCAATGGGATTCGTGCATGCCACACTATACGAGAGCATGCGGCTGTACCCGCCGATACAGTTTGACTCCAAGCACTGTTTGGAGGATGATGTTATGCCGGACGGGACGTGCGTGACGGGGGGCACGAGAGTGACGTACAACCCCTACGCAATGGGCCGGATGGAACGGATCTGGGGGATGGACTGGGCCGAGTTCAGGCCCGAAAGGTGGTTGAACGAGAAGGGTGGTTTTCAGATGGAGAATGCATACAGATACCCTGTGTTTCAAGGGGGAGCACGCACCTGTATTGGGAAAGAGATGTCTGTAATGGAGATGAAGACGGTTATTGTTTCGGTGGTTGGCGAATATGATTTGGAGGTTGTGGATGGTGGGGATTCTTTGGTTTTTGCGCCGGGGCTCACTGCAACCGTTAGCGGTGGGATGAGTGTCAGAGCTCGAAGAAGGCAAGGTGATTAATTGATTGAGGAAAGGGGTCGTTTTGGTTCGGTTCAATTGGTGGATGATGGATTATTTTTGGGTGGGCCGGGTTTGTTTGATGTTTTTGATCTATGATTCTTTTTCCGCTGATGCGACCATCTCTGTTGTACATAAAAAAAAGGGAAATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010907146.1	5.1e-126	cytochrome P450 94C1
Swissprot	Q9ZUX1.1	3.0e-115	12-hydroxyjasmonoyl-L-amino acid 12-hydroxylase
trEMBL	A0A6I9QCL0	3.7e-126	cytochrome P450 94C1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G27690.1	48.09	2e-121	432	CYP94C1	cytochrome P450, family 94, subfamily C, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g508350	AT2G27690.1	472	176	8	38	443	23	491	48.09	2e-121	432
g508350	AT3G48520.1	376	208	4	81	445	125	498	41.22	7e-86	314
g508350	AT5G63450.1	359	191	4	99	445	144	501	43.18	1e-84	310

Ortholog group

Species	Genes
Allium cepa	g314725.t1; g508334.t1; g508350.t1
Allium fistulosum	AfisC2G06389; AfisC8G00033
Allium sativum	Asa0G02589.1; Asa1G04660.1; Asa6G03806.1
Arabidopsis thaliana	AT2G27690.1
Oryza sativa	LOC_Os01g63930.1; LOC_Os01g63930.2; LOC_Os05g37250.1; LOC_Os11g05380.1; LOC_Os12g05440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	104	423	168.2	2.4e-49

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20624	CYP94C1; 12-hydroxyjasmonoyl-L-amino acid 12-hydroxylase / fatty acid hydroxylase	EC:1.14.14.49	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network