result

Gene information

Detail information of g513133


Location
GeneChrStartEndStrand
g513133Scaffold_89704:HRSCAF_472790237280238228+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008785588.14.0e-33WUSCHEL-related homeobox 9-like
SwissprotQ8W0F1.11.4e-30Quiescent-specific homeobox protein
trEMBLA0A8B7BUG82.9e-33WUSCHEL-related homeobox 9-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G11260.144.137e-33 136WOX5;WOX5BWUSCHEL related homeobox 5

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Ortholog group
SpeciesGenes
Allium cepag386440.t1; g513133.t1
Allium fistulosumAfisC2G03818; AfisC3G08001; AfisC5G00897; AfisC6G00339
Allium sativum
Arabidopsis thalianaAT5G05770.1
Oryza sativaLOC_Os01g63510.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain107061.35.3e-17

Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009889Pregulation of biosynthetic process
GO:0010015Proot morphogenesis
GO:0010033Presponse to organic substance
GO:0010073Pmeristem maintenance
GO:0010074Pmaintenance of meristem identity
GO:0010078Pmaintenance of root meristem identity
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019827Pstem cell population maintenance
GO:0022622Proot system development
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0042221Presponse to chemical
GO:0043565Fsequence-specific DNA binding
GO:0048364Proot development
GO:0048507Pmeristem development
GO:0048518Ppositive regulation of biological process
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051094Ppositive regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051240Ppositive regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0098727Pmaintenance of cell number
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1902459Ppositive regulation of stem cell population maintenance
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000036Pregulation of stem cell population maintenance
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905392

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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