result

Gene information

Detail information of g523426

Location

Gene	Chr	Start	End	Strand
g523426	CHR3	100557429	100560871	-

Sequences

CDS

>g523426.t1
ATGAATCAAGAAAAGGATGAGTACCCTGAGTTTGTAGAGGTTGATCCTACAGGCAGATATGGCAGGTATAGTGAAATCCTAGGCAAGGGTTCTTCAAAAATTGTGTATAGAGCTTTTGATGAATATGAAGGAATAGAAGTAGCTTGGAATCAAGTAAAACTGTATGATTTTCTACAGAGCCCAGAAGATTTAGAAAGACTGTACTGTGAGATTCATTTGTTGAAGACTCTAAAACATAAGAACATAATGAAGTTTTATACTTCTTGGGTCGATACATCAAAGAGGAACATTAATTTCGTTACCGAACTTTTCACTTCTGGGACTCTCAGACAGTATAGGCAAAGACATAAGAGAGTTAGCATTAGAGCATTGAAGCATTGGTGCAGGCAAATTCTGAAAGGACTTCTTTATCTTCATAGTCATGATCCTCCTGTAATTCATAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATCAAGGTGAAGTTAAAATTGGAGATCTTGGTCTTGCAGCTATTCTCAGAAAATCCCATGCTGCTCATTGTGTTGGGACGCCGGAATTTATGGCGCCTGAAGTATACGAAGAAGAATACAATGAATTGGTCGACATATACTCATTTGGAATGTGTGTTTTAGAAATGGTGACTTTAGAGTATCCTTACAGTGAATGCACACACCCTGCTCAAATCTACAAGAAGGTTGTTTCGGGGACAAAACCAGAATCACTGTCCAAAATAAAAGATCCCGAAGTCAGAAAATTTGTAGAGAAATGTTTAGTAACGGCATCAAAGAGACTTCCAGCAAGAGAGCTTTTAAAAGATCCTTTTCTTCAATTAGATGATCATACTCCGGTTCGCAATGAAGTAGAAGTTTACGATATTGGGTCCATCTTTAGACAACCTTCTCTTAATCAACTAAGCACAAATGGTGTTTCGAATGGATATATGAATGATTATGACAACCAAAGAGAAGTCGTTAGTGGATGGGATTACGATGTAGCTGATATTTCTACACATGGGATGGACCTCTTCAATAATCATGAAGATGAGCATAAGCAAAATGTCGATATCACAATCAAAGGTAGACGGAAAGAAGATGGTGGGATTTTTCTTCGCCTTAGGATTGCCGATAAAGATGGTCGGGTAAGGAACATATACTTCCCATTCGACATCGAAACGGACACGGCCCTAAGTGTGGCGACCGAGATGGTAGCGGAACTGGACATAACGGACTACGAAGTGACCCGAATCTCAGAAATGATCGACGAAGAAGTCTCCTCCCTAGTACCTGAATGGGAACCCGGACCTGGTATACCCGAAACCCCAAGACACCACGCCTACACCGGCCTATGCAACCATTGCGTGTCCCACGTGTCCTCCTCCTCCCTCCTCGACTACCTCTCCAAATCCCAATCCCTTTCCCACTCCCAACAATCCTCCTCCTCCCACTGCTTCAACTGCATGGCCGTGCATGGTCGGTTCGAGCAAAACATCACCTACCAAGAAGAGCAAAACGTCATGGACGGCGCACCGGGTCTCTCCACCAGCCAATCCGACGAAGACTTCGAAAACGACGACAAACTAAAGCAGATCAACAACGCACGCCGTACCCGAATGGGCAAGTCTATGGGAGACCTCAACATCAGCTTCGACGTACCCGAATATTACTGGATGAACTTATCCGACGAGTCCGAGAACGAGATTAGGCAAGAGCTCAGATGGCTCAAGGCCAAGCATCAAAAAGAACAAAGAGAGTACAAAGAATCGAGCCGGGTCCTTCATCCTTCTCCCGACCATCAAAGTTCGTCGATGAACGATACCTACTTTCAGATCATGGAGAATTTGGAAGGTTTGGATGTTTTCGCCGGCAATGTCTTTTACAATGACGGTTTGGTGCCTAATGGGCTTGCTAGAACCAAGTCGCTGCCTGTAGATGCTGCTGAGGTTTGA

Protein

Gene

>g523426.t1
ATGAATCAAGAAAAGGATGAGTACCCTGAGTTTGTAGAGGTTGATCCTACAGGCAGATATGGCAGGGTAGTTAATTAAGCTTTCAATCACTTGCTAATCTCCAATTTGATAAATGGGTGTTTGCTAATTCACTTAAATTTTGCTTCTTTTGCAGTATAGTGAAATCCTAGGCAAGGGTTCTTCAAAAATTGTGTATGTTATCACACTTTCGAAATGACCAAACTTGATAATTATATCATCTGGCTTTTACTTATTTTTCTGCTTATTTTTTCAGGTATAGAGCTTTTGATGAATATGAAGGAATAGAAGTAGCTTGGAATCAAGTAAAACTGTATGATTTTCTACAGAGCCCAGAAGATTTAGAAAGACTGTACTGTGAGATTCATTTGTTGAAGACTCTAAAACATAAGAACATAATGAAGTTTTATACTTCTTGGGTCGATACATCAAAGAGGAACATTAATTTCGTTACCGAACTTTTCACTTCTGGGACTCTCAGACAGTAAGATCTCAAATTCCTTCTTCCTTTTTTTCTTTTCAGATATTTTTGTTACCGACCGTTTTAAACTAATACTGATTAAATCCATATAGGTATAGGCAAAGACATAAGAGAGTTAGCATTAGAGCATTGAAGCATTGGTGCAGGCAAATTCTGAAAGGACTTCTTTATCTTCATAGTCATGATCCTCCTGTAATTCATAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATCAAGGTGAAGTTAAAATTGGAGATCTTGGTCTTGCAGCTATTCTCAGAAAATCCCATGCTGCTCATTGTGTTGGTAGGTTTACATTGTTATTTTTCAATGTCAAGTCCCAATATCTTCATGCACAATTTCAGACCATATTCAAATATGAATCTTGTTCATTGTTTTGCAAAATGTTGTTGTGACATCAGTTTAATTATGTAGTCGATGTACATGAATACCATCTGTAGAAACCAGACGATGCTTAGAGTGTTGTTTTTTTGGCAGGGACGCCGGAATTTATGGCGCCTGAAGTATACGAAGAAGAATACAATGAATTGGTCGACATATACTCATTTGGAATGTGTGTTTTAGAAATGGTGACTTTAGAGTATCCTTACAGTGAATGCACACACCCTGCTCAAATCTACAAGAAGGTTGTTTCGGTAAGATCTCTATTACATAAAACCTTCAAAATTGTTACTCTTACGCCCACTTTATTTTGTACGGATACACCTATGTATGTAGACCATCGCATTTATAAACCTATGTATCATGACTTTGGTATTCCACAACAGTATATGATCTTCATCTTGATTCTTAAACCTTAGCAAATTTAAAACTATATCAGTAGAATGATAGTGTTATTGTAATTCAGGGGACAAAACCAGAATCACTGTCCAAAATAAAAGATCCCGAAGTCAGAAAATTTGTAGAGAAATGTTTAGTAACGGCATCAAAGAGACTTCCAGCAAGAGAGCTTTTAAAAGATCCTTTTCTTCAATTAGATGATCATACTCCGGTTCGCAATGAAGTAGAAGTTTACGATATTGGGTCCATCTTTAGACAACCTTCTCTTAATCAACTAAGCACAAATGGTGTTTCGAATGGATATATGAATGATTATGACAACCAAAGAGAAGTCGTTAGTGGATGGGATTACGATGTAGCTGATATTTCTACACATGGGATGGACCTCTTCAATAATCATGAAGATGAGCATAAGCAAAATGTCGATATCACAATCAAAGGTAGACGGAAAGAAGATGGTGGGATTTTTCTTCGCCTTAGGATTGCCGATAAAGATGGTAAGATCAAAATCTCCTTGTTTCCATCATGAGAAAACTGAATACTTCGTGCATTTTCAAATTTCAACGGTTTCGTTATAGATAGCTGATCGTTACATTAGTTGGAGGGGCTCTTAAGTCAATTCATCTCCTCTGATTCAAAACTAGAGCACGGGGTACACTAACAAAATTAGATACTCTACTTGTTATTGACGGTATGATCCTCTAGTTCAAAACTAGAGTGGTGGTGCTCTGGCTTTCTTTGAATGCAATGCACCAGAATTTTAGAGCAATTAGATTGATTAAAAAGATGCGAAAATACACCGGTTTGGGTTTTTCATGAACATTAGACTCGTCAACATGCGTTTGTTAGTGTACCCCTGCTCAAACGATCTGATTCTAGTTGTTGTAGCATATAAAACAACGTGGAAATTAGGATCCGTTTCTTATTTTCAAACTTAAAACACGAAATACTTATCATAAACACATGTTTGAGCTACAACTCTAAAATTATTTTCAACAATTTTATTCGTTTTTTTTTTCAATATCAGTTCTGCAGTTAATCGTAAGCGACCAAAATTAAACATTTATAATTATTTTTGAATTTTGTTTCAAAAACACAAATATTTGCAGTGCAGTTCAACAAACCGCAAATTTTGTAGTTTATACTTCAAATATTCGTTGCTTACATTGTAAATATTTACTATAGTTTGACTGAAACTAAAAATAATTGTGTTTTTTAAAGCATGTCTTCCAAGGGCAGCTTTTATATTTTGCAACTCAAAAACGATGTTTTACAAAACTTCTCTAAAACAACTTCTAGCTAACCCGATAAAACCCTTCTATAGGTCGGGTAAGGAACATATACTTCCCATTCGACATCGAAACGGACACGGCCCTAAGTGTGGCGACCGAGATGGTAGCGGAACTGGACATAACGGACTACGAAGTGACCCGAATCTCAGAAATGATCGACGAAGAAGTCTCCTCCCTAGTACCTGAATGGGAACCCGGACCTGGTATACCCGAAACCCCAAGACACCACGCCTACACCGGCCTATGCAACCATTGCGTGTCCCACGTGTCCTCCTCCTCCCTCCTCGACTACCTCTCCAAATCCCAATCCCTTTCCCACTCCCAACAATCCTCCTCCTCCCACTGCTTCAACTGCATGGCCGTGCATGGTCGGTTCGAGCAAAACATCACCTACCAAGAAGAGCAAAACGTCATGGACGGCGCACCGGGTCTCTCCACCAGCCAATCCGACGAAGACTTCGAAAACGACGACAAACTAAAGCAGATCAACAACGCACGCCGTACCCGAATGGGCAAGTCTATGGGAGACCTCAACATCAGCTTCGACGTACCCGAATATTACTGGATGAACTTATCCGACGAGTCCGAGAACGAGATTAGGCAAGAGCTCAGATGGCTCAAGGCCAAGCATCAAAAAGAACAAAGAGAGTACAAAGAATCGAGCCGGGTCCTTCATCCTTCTCCCGACCATCAAAGTTCGTCGATGAACGATACCTACTTTCAGATCATGGAGAATTTGGAAGGTTTGGATGTTTTCGCCGGCAATGTCTTTTACAATGACGGTTTGGTGCCTAATGGGCTTGCTAGAACCAAGTCGCTGCCTGTAGATGCTGCTGAGGTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257226.1	4.9e-257	probable serine/threonine-protein kinase WNK9
Swissprot	A2YMV6.2	1.3e-201	Protein kinase with no lysine 1
trEMBL	A0A5P1FAF8	3.5e-257	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04910.1	57.61	0.0	735	ATWNK1;WNK1;ZIK4	with no lysine (K) kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g523426	AT3G04910.1	696	232	17	7	647	10	697	57.61	0.0	735
g523426	AT3G04910.2	668	227	17	35	647	15	674	56.59	0.0	686
g523426	AT3G22420.1	579	183	13	11	581	14	524	55.27	2e-171	599

Ortholog group

Species	Genes
Allium cepa	g257359.t1; g523426.t1
Allium fistulosum	AfisC3G05654; AfisC5G00727
Allium sativum	Asa2G04647.1; Asa6G06500.1
Arabidopsis thaliana	AT3G04910.1; AT3G04910.2; AT3G04910.3; AT5G28080.1; AT5G28080.2
Oryza sativa	LOC_Os07g38530.1; LOC_Os07g38530.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	24	278	169.7	7.1e-50

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0005829	C	cytosol
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08867	WNK, PRKWNK; WNK lysine deficient protein kinase	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network