result

Gene information

Detail information of g525286

Location

Gene	Chr	Start	End	Strand
g525286	Scaffold_91133:HRSCAF_474219	195265	195888	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276710.1	2.4e-32	transcription repressor OFP3-like
Swissprot	Q9LVL4.1	3.1e-16	Ovate family protein 3
trEMBL	A0A5P1EBK9	1.7e-32	Transcription repressor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58360.1	46.74	7e-21	97.1	ATOFP3;OFP3	ovate family protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g525286	AT5G58360.1	92	49	116	207	203	294	46.74	7e-21	97.1
g525286	AT5G01840.1	61	23	141	201	202	262	62.30	3e-19	91.7
g525286	AT2G30400.1	66	30	137	202	252	317	54.55	8e-18	87.0

Ortholog group

Species	Genes
Allium cepa	g25586.t1; g366973.t1; g525286.t1
Allium fistulosum	AfisC1G08880; AfisC3G01829; AfisC7G00107
Allium sativum	Asa2G07452.1; Asa7G07107.1; Asa7G07108.1
Arabidopsis thaliana	AT1G06920.1; AT2G30400.1; AT5G01840.1; AT5G58360.1
Oryza sativa	LOC_Os01g60810.1; LOC_Os05g25910.1; LOC_Os05g39950.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13724.3	DNA_binding_2	Domain	1	31	63.5	1.5e-17
PF04844.10	Ovate	Family	145	201	84.7	2.9e-24

Gene Ontology

Accession	Ontology	Name
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0009890	P	negative regulation of biosynthetic process
GO:0009892	P	negative regulation of metabolic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010558	P	negative regulation of macromolecule biosynthetic process
GO:0010605	P	negative regulation of macromolecule metabolic process
GO:0010629	P	negative regulation of gene expression
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031324	P	negative regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031327	P	negative regulation of cellular biosynthetic process
GO:0045934	P	negative regulation of nucleobase-containing compound metabolic process
GO:0048519	P	negative regulation of biological process
GO:0048523	P	negative regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051172	P	negative regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051253	P	negative regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1902679	P	negative regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903507	P	negative regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2000113	P	negative regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network