result

Gene information

Detail information of g529330

Location

Gene	Chr	Start	End	Strand
g529330	CHR2	4720112	4722116	-

Sequences

CDS

Protein

Gene

>g529330.t1
ATGGATGGATTCTTTTTTGAGGCTGTTTTGATTTCTCTCTTCGTTTTAGCAGCCTTTGTTTATATCTTTAACCATTATTCTCCCTTGTTCATTTTGAATTTAAAAGACTTGCCTAGAGGGAGTTTTGGATGGCCTTTGATTGGCCAAACTTTGAATTTTTTGAGCCCACGTGGCTCTGGCAATCTTGGCACTTTTTTGGAAGATCATATTTCCAGGTTTGTATCACTTTCTTTACATTGTAGATTGTTATGTAGTAAAAATAACCAAGTAATGCTTACATGCATGATGAAAATGATGCCAATACGACTTTTTAAACAGGTATGGTAGAGTGTTCAGGTCTCATCTCTTCTGCACTCCAACGATTGTGTCATGTGATCAAGAACTGAACCACTTCATACTTCAAAATGAAGAGAAGCTTTTTCAGTGCAGTTACCCAAAGCCAATTCATGGAATACTCGGCAACTCTTCTATGATTGCTGTAGTTGGAGATACTCACAAGAGGTTAAGAAATTTAGCTGTAGCACTTGTAACTACAATCAAGTCAAGTCTTACTTATTTAAGTGATATTGAGGAGATTGCGGTTCACATTCTTGACTCTTGGAGAGATGATCAAACTGTTTTCTTCTGTAAAGAAGCTAAAAAGGTCACATTATATGCTTCTTTTCTTTTAGCTCTGAAACTGAAATTTCTTTTTCCAATCTTACTATCATGTTGTTATTTTTCTCCTTGGGATTATATGAAAATAAAAATGCTTAAGCACAGAGTGTATGCAACTATTGTTGCTTTGTTTTTATACAATATGGAAAATGTTTTTGATGCTTGGAAAACCAAAAACCTTACAATTCACTTAAGTGTTTCGTTTTAAAAGTATCTTATTCCTTCCATGGAGCCAAAGCAGACATGATATAATGTTGAAAAATACTTATATTGTTAAATTTTCACTTTACAGTTCACATTCAGTGTCATAGTAAAGCAAGTGCTTGGATGATCACAAGATGATTTAGAGAGTGCAAAAATACTAAGATTTTCAAACTTTTATGAAAGGACTCATTTCCTTACCTTTACATATGCCAGGAAGCCACTATGCTAAAGCCGTTAAGGTAAATATTCTCTTCTCATCTAGTTAAACAACTTGTCTATCAATTAATATTTCCCAAACTTGTAAACTTTCGTATTTACCTTTTTATGGCGAGAGCAAGAATTTCACCAACTGTGAAAGCTATGATAGAAAAAAAGCAAGGGAATGGAAAAGACTGCAAGAAAAAAGTAGACTTTCTTGATGTATTATTGTCAACTGATAGCTTAAGTGAGGATGAGAAAGTTAGCTTTGTACTTGATACATTGTTAGGCGGATACGAGAGAGCTTCACTCTTGATATCGATGGCAGTTTATTTCCTACATCAATATCCTTCCTCCTTTAAAAAACTCAAGGTAAATTCAGATTAAAGTTTAAATATTTTAATTATTTAAATATACGTTCAGCTTACATCTAATTTTTTACGCTAATCTTTGATTCAGTCGGAGCATCAAAGCATCAGGATCAGCAAGAAGAAAGAAGAGTATCTAAATTTGCATGATTACAAGAAAGTGTACTTCACCCAAAATGTTAGTGGAATTACTTTATGTATAAAAGATTAGTGTATGGATTTACAATTTTATCTACTTTACACAAGCATATATAACTTTTTCTTTGGCTATTCTAACAGGTAATCAATGAAGCTTTAAGATGTGGAAACATTGTAAAGTTTGTTCATAGAAAGGCATTGAAAGATGTCATATTCAAAGGTGATAATTTCTAGCATGTAAGATATTTCAATTTTATTCACTGCTTCACATGGTCTTGCATGCAGTTTTAATCTAAAAGAAAGGCTATTTATAACAAGTAATAAAAAAAATGAGTTTGCAATTTGACAGGACACCTGATTCCTTGTGGTTGGAAAATATTGCCAATATTGAGTGCAGTGCATCTAGATTCCTCCCTTCACCCAAATCCCCTGCATTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK69329.1	4.9e-96	uncharacterized protein A4U43_C05F21710
Swissprot	Q6F4F5.1	1.2e-83	OsDWARF11
trEMBL	A0A5P1EXI5	3.5e-96	Cytochrome P450 724B1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G05690.2	32.59	5e-36	148	CBB3;CPD;CYP90;CYP90A;CYP90A1;DWF3	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g529330	AT5G05690.2	313	160	8	37	302	31	339	32.59	5e-36	148
g529330	AT5G05690.1	314	160	7	37	302	31	339	32.17	8e-36	147
g529330	AT3G50660.1	145	81	0	36	180	38	182	44.14	1e-35	147

Ortholog group

Species	Genes
Allium cepa	g294975.t1; g418353.t1; g529330.t1
Allium fistulosum	AfisC1G00955; AfisC8G02417; AfisC8G02422; AfisC8G02517
Allium sativum	Asa1G02829.1; Asa1G02833.1
Arabidopsis thaliana	AT5G14400.1
Oryza sativa	LOC_Os04g39430.1; LOC_Os04g39430.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	188	279	32.5	3.4e-08

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0005488	F	binding
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006694	P	steroid biosynthetic process
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0008610	P	lipid biosynthetic process
GO:0009058	P	biosynthetic process
GO:0009314	P	response to radiation
GO:0009416	P	response to light stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009642	P	response to light intensity
GO:0009646	P	response to absence of light
GO:0009647	P	skotomorphogenesis
GO:0009791	P	post-embryonic development
GO:0010268	P	brassinosteroid homeostasis
GO:0010817	P	regulation of hormone levels
GO:0016125	P	sterol metabolic process
GO:0016128	P	phytosteroid metabolic process
GO:0016129	P	phytosteroid biosynthetic process
GO:0016131	P	brassinosteroid metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0020037	F	heme binding
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042445	P	hormone metabolic process
GO:0042446	P	hormone biosynthetic process
GO:0042592	P	homeostatic process
GO:0044238	P	primary metabolic process
GO:0046906	F	tetrapyrrole binding
GO:0048037	F	cofactor binding
GO:0048856	P	anatomical structure development
GO:0048878	P	chemical homeostasis
GO:0050896	P	response to stimulus
GO:0055088	P	lipid homeostasis
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901360	P	organic cyclic compound metabolic process
GO:1901362	P	organic cyclic compound biosynthetic process
GO:1901363	F	heterocyclic compound binding
GO:1901576	P	organic substance biosynthetic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901617	P	organic hydroxy compound biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12639	CYP724B1, D11; cytochrome P450 family 724 subfamily B polypeptide 1	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network