Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g532575 | Scaffold_91940:HRSCAF_475026 | 37203 | 58224 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | MQM13645.1 | 2.4e-111 | hypothetical protein |
Swissprot | Q5QM27.1 | 3.5e-107 | Tubby-like F-box protein 9 |
trEMBL | D6MKK0 | 3.2e-118 | Transcription factor (Fragment) |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G53320.1 | 63.12 | 2e-106 | 382 | AtTLP7;TLP7 | tubby like protein 7 |
Species | Genes |
---|---|
Allium cepa | g454822.t1; g532575.t1 |
Allium fistulosum | AfisC2G04119; AfisC3G04589 |
Allium sativum | Asa2G03644.1 |
Arabidopsis thaliana | AT1G53320.1 |
Oryza sativa | LOC_Os01g48370.1; LOC_Os05g43850.1; LOC_Os05g48670.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00646.30 | F-box | Domain | 129 | 172 | 28.3 | 1.1e-06 |
PF01167.15 | Tub | Domain | 194 | 403 | 202.1 | 7.9e-60 |
Accession | Ontology | Name |
---|---|---|
GO:0005886 | C | plasma membrane |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0001067 | F | regulatory region nucleic acid binding |
GO:0003674 | F | molecular_function |
GO:0003676 | F | nucleic acid binding |
GO:0003677 | F | DNA binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0016020 | C | membrane |
GO:0005829 | C | cytosol |
GO:0005488 | F | binding |
GO:0005543 | F | phospholipid binding |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0005737 | C | cytoplasm |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0008289 | F | lipid binding |
GO:0007275 | P | multicellular organism development |
GO:0008150 | P | biological_process |
GO:0009536 | C | plastid |
GO:0009555 | P | pollen development |
GO:0009605 | P | response to external stimulus |
GO:0009607 | P | response to biotic stimulus |
GO:0051707 | P | response to other organism |
GO:0009620 | P | response to fungus |
GO:0009889 | P | regulation of biosynthetic process |
GO:0010468 | P | regulation of gene expression |
GO:0010556 | P | regulation of macromolecule biosynthetic process |
GO:0044212 | F | transcription regulatory region DNA binding |
GO:0019219 | P | regulation of nucleobase-containing compound metabolic process |
GO:0019222 | P | regulation of metabolic process |
GO:0031323 | P | regulation of cellular metabolic process |
GO:0031326 | P | regulation of cellular biosynthetic process |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0035091 | F | phosphatidylinositol binding |
GO:0043167 | F | ion binding |
GO:0043168 | F | anion binding |
GO:0043207 | P | response to external biotic stimulus |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0044424 | C | intracellular part |
GO:0044444 | C | cytoplasmic part |
GO:0044464 | C | cell part |
GO:0048229 | P | gametophyte development |
GO:0048856 | P | anatomical structure development |
GO:0050789 | P | regulation of biological process |
GO:0050794 | P | regulation of cellular process |
GO:0050896 | P | response to stimulus |
GO:0051171 | P | regulation of nitrogen compound metabolic process |
GO:0051252 | P | regulation of RNA metabolic process |
GO:0051704 | P | multi-organism process |
GO:0060255 | P | regulation of macromolecule metabolic process |
GO:0065007 | P | biological regulation |
GO:0071944 | C | cell periphery |
GO:0080090 | P | regulation of primary metabolic process |
GO:0097159 | F | organic cyclic compound binding |
GO:1901363 | F | heterocyclic compound binding |
GO:1903506 | P | regulation of nucleic acid-templated transcription |
GO:2000112 | P | regulation of cellular macromolecule biosynthetic process |
GO:2001141 | P | regulation of RNA biosynthetic process |
GO:0140110 |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |