result

Gene information

Detail information of g532763

Location

Gene	Chr	Start	End	Strand
g532763	Scaffold_91951:HRSCAF_475037	275435	277860	+

Sequences

CDS

>g532763.t1
ATGACATCAGTTGTGAAAAATGGCAATTTTAGGGGAGTATATGATAATAGCTCTAGTATCTCTATTAATGGGAAAAATATTGTTAACTTTGGGAAGGAAGTTGGGAATATGCTACATATGGGCAAAAAGAGAAGGACACCGACATGTCACCAATGTCTACACAGTTCTAAAGACGATCTAGTTCTTTGTTCTAGATGCCGATGCAAGTGGTATTGCACTACTTGCTTGGCCAATTGGTACCCTGCACAAACAAGGGAGAAATTAAAGGGAGCCTGCCCATGTTGTCTAGGCAACTGCAACTGCACAAAATGCTTGCTCAATCCTGGAATAATTGCTGTTGATCATCTTAAAAGTGATGCCATCACAAAATTGAAGCAGCTTCTATACTTGATTCACAAAACCTCTCCTCTTGTTTGGAACATTGACTTGGAGAATACATTTGAACTGCAGGCAGAAATGAGAATCCGAGGCACTGAATTAACCAGTGATGACGTCATGGAAGCTGTGGTTGGCATGGATGAGCGCATTTATTGCAATAACTGCTACACATCAATAGTTGATTTCCATAGAAGCTGTACAAAATGTTCATACGATCTATGTATTGCATGCTGTCGAGAACTTCGAGAAGGTTTAATACCTGGAGTTAATGTATCAGACTCTTCACATAGACAATTTGATACACAAACTAAGTGTCAAAATTATTCATCAAGAAAGAGATTTGGTTGGGAAAGTGCAAATTTGATTGCGAAAGATATATTTTACATGTGTGGCCCTGTACACTGGAAAGCATATGAAGATGGCAGCATTCCATGTCCACCTAGAAACTTCGGTGGTTGTGGAAATGGGTTGCTAGTGCTAAGGAAAAATTTCAAAAGTGATTTTTTGAAAACATTGCTTCAGGAAGCTGATTGTTTAACTAGTAAATATACATTTCTAGATGAAGATGGATATGATGATTTTCCCAATTGTTCAGACTGTTCTTGGAACAATTGCAATGTGAGGAAAGCTGCATCTCGTGAAGGTAGTCATGATAATCTTTTGTATTGCCCAAGTGTAGCCGATTTTGAAGACGGTGATTTAGTGCATTTTAGGCGTCATTGGGAAAATGGAGAGCCTGTTATTGTAAGATCAGTTTTTAACAATACATGTGGGTTAAGTTGGAAGCCATTAGCTATGTGGCATGCTATTAAAGAGACAAACCCAGAAAATTTGGAAGAGAATTGTGATTTTGTGAGAGCAATTGACTGCTTGGATTGGAGTGAGGCAAGTCCTTTCTGCTAG

Protein

Gene

>g532763.t1
ATGACATCAGTTGTGAAAAATGGCAATTTTAGGGGAGTATATGATAATAGCTCTAGTATCTCTATTAATGGGAAAAATATTGTTAACTTTGGGAAGGAAGTTGGGAATATGCTACATATGGTAAGTTGATAGCTTATTCTCTTCTCTTTTTTCTGTACTTTTTTAACATTCACTTGTGTCTTCATTATTCTTAATCACATTTAAGAAAGTTTGTTGCACTTAATTGTGAGATTTCATCTCATAAAAGTTTTATTGCTGTATGCAGAAATATTATCCTATCATTGACATTAGCAGCCTGTTTCTACATAAAATATCAGTCATACACTGCAGACCTTTGTGATATGTTTGAATGGTCATGCAGTTTGTTGATCTCAGTATGAACAGCTAACAGCTGTGTTGTATTTGTTATATAAATATCTCACTCATACCGTAATTTTGGTTAATAAGGGCAAAAAGAGAAGGACACCGACATGTCACCAATGTCTACACAGTTCTAAAGACGATCTAGTTCTTTGTTCTAGATGCCGATGCAAGTGGTATTGCACTACTTGCTTGGCCAATTGGTAAGTATTAGATTCTTTTCATCCAGTTCTATTACAAGTACAATATAATGAGTGTTACTAAAGAAATTTGAAGTTTTGTCATTTTCTGATTATTACCGTGTTGCTAGGTACCCTGCACAAACAAGGGAGAAATTAAAGGGAGCCTGCCCATGTTGTCTAGGCAACTGCAACTGCACAAAATGCTTGCTCAATCCTGGAATAATTGCTGTAATTTTGTCAAAAATTTCCATTTAGAACCATCCTTCTTTGCAAGCCTATTAATCACATATATTTGTTATCCTCAGGTTGATCATCTTAAAAGTGATGCCATCACAAAATTGAAGCAGCTTCTATACTTGATTCACAAAACCTCTCCTCTTGTTTGGAACATTGACTTGGAGAATACATTTGAACTGCAGGCAGAAATGAGAATCCGAGGCACTGAATTAACCAGTGATGACGTCATGGAAGCTGTGGTTGGCATGGATGAGCGCATTTATTGGTGAGCTTCAAACATAACTTTTATGATGTCTGTACGTTTGGACCTTAACAATACCTGTTCCATGTGCTGTTGAATATACTTCAACCTTTTTGCTACTTGGCACTTGTACATTCTGTACTTGTTTATTCTTTAGCCCAATCTGTACCCCTTAGGTTTTTTTTTTTTTTTTTTAACCTAGCAGTAACCTATTTTATACTAGCTGCATATGTGTTTTTTCCCCTTTTTTTGCTTCAGTATTATAGGACATTTGACTGGGAAAGAACACCATGAAAGCTCCTCAAACTTCATGAACGCAGTTAACTTGATTATCAATGTACTATTTGTGAACGTTATGGAGCATATTAGTGTAATGTTATCATATGATCTCTCTGACAGGCTCATCTTGCATCCTAATGATTCATTAATCTCGTACCTGTTAGAAACAAAGATATAAGATAACAAAATTTGAATTGTTTTTTAAAACAAACATGTATTATCAAATCTTACGACCATAGCGAGTAAATTCATTAATGCTCTTACATTTTGGGGCGGTGTCTCCCATACATGTTTGAATCGCCGACTCTAGAGACTAGAGAGGAGTGTGTCTGTCTAGTCAACTTTATGAAGCTGAAACATGTGATGCCTCATTTTGCAGCAATAACTGCTACACATCAATAGTTGATTTCCATAGAAGCTGTACAAAATGTTCATACGATCTATGTATTGCATGCTGTCGAGAACTTCGAGAAGGTTTAATACCTGGAGTTAATGTATCAGACTCTTCACATAGACAATTTGATACACAAACTAAGTGTCAAAATTATTCATCAAGAAAGAGATTTGGTTGGGAAAGTGCAAATTTGATTGCGAAAGATATATTTTACATGTGTGGCCCTGTACACTGGAAAGCATATGAAGATGGCAGCATTCCATGTCCACCTAGAAACTTCGGTGGTTGTGGAAATGGGTTGCTAGTGCTAAGGAAAAATTTCAAAAGTGATTTTTTGAAAACATTGCTTCAGGAAGCTGATTGTTTAACTAGTAAATATACATTTCTAGATGAAGATGGATATGATGATTTTCCCAATTGTTCAGACTGTTCTTGGAACAATTGCAATGTGAGGAAAGCTGCATCTCGTGAAGGTAGTCATGATAATCTTTTGTATTGCCCAAGTGTAGCCGATTTTGAAGACGGTGATTTAGTGCATTTTAGGCGTCATTGGGAAAATGGAGAGCCTGTTATTGTAAGATCAGTTTTTAACAATACATGTGGGTTAAGTTGGAAGCCATTAGCTATGTGGCATGCTATTAAAGAGACAAACCCAGAAAATTTGGAAGAGAATTGTGATTTTGTGAGAGCAATTGACTGCTTGGATTGGAGTGAGGCAAGTCCTTTCTGCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK69164.1	5.5e-108	uncharacterized protein A4U43_C05F20010
Swissprot	Q9SSE9.1	1.1e-44	Protein JUMONJI 25
trEMBL	A0A5P1ETN3	4.0e-108	JmjC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G00990.1	38.80	2e-68	256		Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g532763	AT4G00990.1	384	207	10	48	422	79	443	38.80	2e-68	256
g532763	AT1G11950.1	370	227	4	49	417	193	550	35.14	2e-63	240
g532763	AT1G62310.1	378	236	3	41	417	201	568	34.66	2e-63	240

Ortholog group

Species	Genes
Allium cepa	g296252.t1; g376196.t1; g532763.t1; g95844.t1
Allium fistulosum	AfisC7G01377; AfisC8G03615; AfisC8G03636
Allium sativum	Asa1G01670.1; Asa3G03714.1; Asa5G03460.1; Asa6G03280.1; Asa6G06286.1
Arabidopsis thaliana	AT4G00990.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF10497.6	zf-4CXXC_R1	Domain	46	120	26.8	4.3e-06

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15601	KDM3; [histone H3]-dimethyl-L-lysine9 demethylase	EC:1.14.11.65	Thermogenesis	ko04714

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network