Detail information of g538065
| Gene | Chr | Start | End | Strand |
|---|
| g538065 | Scaffold_92581:HRSCAF_475667 | 79706 | 83479 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020241351.1 | 4.1e-107 | E3 ubiquitin-protein ligase MIEL1-like |
| Swissprot | Q8VZK0.1 | 6.8e-91 | RING-type E3 ubiquitin transferase MIEL1 |
| trEMBL | A0A2I0B591 | 7.2e-106 | RING finger and CHY zinc finger domain-containing protein 1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT5G18650.1 | 67.79 | 2e-109 | 392 | MIEL1 | CHY-type/CTCHY-type/RING-type Zinc finger protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g538065 | AT5G18650.1 | 267 | 79 | 2 | 23 | 282 | 1 | 267 | 67.79 | 2e-109 | 392 |
| g538065 | AT3G62970.1 | 255 | 91 | 1 | 32 | 280 | 27 | 281 | 61.96 | 6e-98 | 353 |
| g538065 | AT5G25560.1 | 264 | 100 | 4 | 20 | 273 | 41 | 304 | 58.33 | 2e-89 | 325 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF05495.9 | zf-CHY | Domain | 40 | 114 | 72.3 | 3.3e-20 |
| PF13639.3 | zf-RING_2 | Domain | 168 | 211 | 34.1 | 2.2e-08 |
| PF14599.3 | zinc_ribbon_6 | Domain | 216 | 273 | 90.4 | 4.9e-26 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K10144 | RCHY1, PIRH2; RING finger and CHY zinc finger domain-containing protein 1 | EC:2.3.2.27 | Ubiquitin mediated proteolysis | ko04120 |
| p53 signaling pathway | ko04115 |