Detail information of g54185


Location
GeneChrStartEndStrand
g54185Scaffold_30097:HRSCAF_2755988005481115-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020259553.17.7e-59probable receptor-like protein kinase At4g10390
SwissprotP0DKI6.14.5e-48Probable receptor-like protein kinase At1g33260
trEMBLA0A5P1F7K75.5e-59Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G33260.136.101e-49 193Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag174546.t1; g174550.t1; g205731.t1; g255096.t1; g255102.t1; g513048.t1; g513054.t1; g513060.t1; g513063.t1; g513066.t1; g513070.t1; g513094.t1; g513098.t1; g513100.t1; g54185.t1; g7577.t1; g7584.t1; g87896.t1; g87897.t1; g87901.t1; g87907.t1
Allium fistulosumAfisC2G07209; AfisC2G07210; AfisC2G07211; AfisC2G07212
Allium sativumAsa6G04372.1; Asa6G04373.1; Asa6G04374.1; Asa6G04375.1; Asa6G04381.1; Asa6G04383.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain12128367.79.1e-19

Gene Ontology
AccessionOntologyName
GO:0006950Presponse to stress
GO:0008150Pbiological_process
GO:0009611Presponse to wounding
GO:0050896Presponse to stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.