result

Gene information

Detail information of g66594

Location

Gene	Chr	Start	End	Strand
g66594	Scaffold_33570:HRSCAF_322626	23906	25696	-

Sequences

CDS

>g66594.t1
ATGAGTTGCTTTTCTCGCTTTCTCAAGGGAAAAAATGGGCTTAGTGTGGATAGCGATGAAGAGATTTTACAAATTGAAAATGTGAAGATGTTCACCTATAAAGAGCTGAGACATGCGACAAAAGCTTTCTGCCTTGCTAGTAAAATTGGCGAGGGGGGTTTCGGACCTGTTTACAAGGGAACACTTAAAGACGGGACAATTGTAGCTATAAAAGCATTGTCAAAGGAGTCCAATCAAGGAAAAAGAGAGTTTTTAACAGAGATAAATGTAATCTCTAACATTATCCATGAGAATCTTGCTCGATTAAATGGCTGTTGTGTTGAAAAAGATCATAGACTTCTGGTTTATAGTTATATTGAGAACAACAGCCTTGCTCAGACGCTTCTCGGTGCAAATCAAAGTGGCATTCAGTTCAGTTGGAAAGTAAGAAGTAAGATATGCATCGGAATAGCTCAAGGACTAGCGTTTCTCCACGAGGAAGTTCGACCACATATAGTCCATCGTGATATCAAAGCAGGCAATATTCTTCTTGATGAAAATCTAAACCCTAAAATTTCAGATTTTGGGCTAGCCAAGCTTCTACCTCCAGCTATGACACATATTAGCACTCGTGTTGCTGGAACAATAGGTTACTTGGATCCGGAATATGCTATCCGAGGGCAGGTAACACGACAATCTGATGTTTATGGATTTGGCGTTCTTCTATTGGAGATTGTGAGTGGAAGAAGCAACACCGACACAAGATTACCGTATGAAGAACAAATTCTTCTTGAATGGACATGGTTACTATATGAACAAGGAAAACTTTCAAGAATCGTAGACACTGAGATAAGTGAAGAATCAAAGATTGAAGAGGCATGTAAATTCCTGAAAGTTGGTCTTCTATGCACACAATATGGGCCCAAGCTTCGCCCGTCCATGTCGAAGGCAGTTAAATTGCTGAAAGGAGAGATTGATGTGGACTCTATAAAAATTAATCATCCAGGTTTGATATCTGATATCATGGACTTCAGAATTAGAAGCAATGATAATTCCAATGACATGAAAAATACAGCATCCATTCCGTCATCTCTTGAAAGTTGA

Protein

Gene

>g66594.t1
ATGAGTTGCTTTTCTCGCTTTCTCAAGGGAAAAAATGGGCTTAGTGTGGATAGCGATGAAGGTACATAAACATTGTAAATGATGTGCTCTTAGTCATCAATTAATTTCATCATAAGGATCATATCATATGTTATCATTCTTCAGAGATTTTACAAATTGAAAATGTGAAGATGTTCACCTATAAAGAGCTGAGACATGCGACAAAAGCTTTCTGCCTTGCTAGTAAAATTGGCGAGGGGGGTTTCGGACCTGTTTACAAGGTACTGATTGCTTTAGAAAATGCATCGATGTACGTGACATATGGTTTCTAATTACCTGTATTGGTTTAGGGAACACTTAAAGACGGGACAATTGTAGCTATAAAAGCATTGTCAAAGGAGTCCAATCAAGGAAAAAGAGAGTTTTTAACAGAGATAAATGTAATCTCTAACATTATCCATGAGAATCTTGCTCGATTAAATGGCTGTTGTGTTGAAAAAGATCATAGACTTCTGGTTTATAGTTATATTGAGAACAACAGCCTTGCTCAGACGCTTCTCGGTAATTTTATATGTTCCATCTTGAAAATAACTGTTTATACCATGTTGGAAGCTTTAGTACGTAGATTTTTGTATTTGAAGGGATTAACATGGAACAAAATTCAACTGATTTGCCTTCATATATAACTTGCCACATTAGGAAAAACTGCATGGCATATCATTGTTGGTGTTCCCTTTGCTTAACCGTCAACTTTATATGGTCATGTATAGGTGCAAATCAAAGTGGCATTCAGTTCAGTTGGAAAGTAAGAAGTAAGATATGCATCGGAATAGCTCAAGGACTAGCGTTTCTCCACGAGGAAGTTCGACCACATATAGTCCATCGTGATATCAAAGCAGGCAATATTCTTCTTGATGAAAATCTAAACCCTAAAATTTCAGATTTTGGGCTAGCCAAGCTTCTACCTCCAGCTATGACACATATTAGCACTCGTGTTGCTGGAACAATGTGAGTTTATTCCAATTTATTATTTCATCATTTTTTTTAATACCTGATAAACTGGACAATGTCTATAAACTTCTGAGCATGTATATACTATATACAGAAACATATGATGCATATTCCAGATTGTTTAAAAAGGCTTGTACTATCATTAAGAATGAACTATTGCATCTTTTGTTTGACATCTCAGAACTTTAATGAGATAAGTTATGCTATATATGGGGTTCTATTTTCAAAATTTTATTATACATGTTTTTTGAACAGAGGTTACTTGGATCCGGAATATGCTATCCGAGGGCAGGTAACACGACAATCTGATGTTTATGGATTTGGCGTTCTTCTATTGGAGATTGTGAGTGGAAGAAGCAACACCGACACAAGATTACCGTATGAAGAACAAATTCTTCTTGAATGGGTATGTCACTTGCTTTATATGATTCTCCTTCATTTACACTGAGATAGAAGAGCATGCATATGTATCATTAGTCTGTACTTGTACTGTAGACATGGTTACTATATGAACAAGGAAAACTTTCAAGAATCGTAGACACTGAGATAAGTGAAGAATCAAAGATTGAAGAGGCATGTAAATTCCTGAAAGTTGGTCTTCTATGCACACAATATGGGCCCAAGCTTCGCCCGTCCATGTCGAAGGCAGTTAAATTGCTGAAAGGAGAGATTGATGTGGACTCTATAAAAATTAATCATCCAGGTTTGATATCTGATATCATGGACTTCAGAATTAGAAGCAATGATAATTCCAATGACATGAAAAATACAGCATCCATTCCGTCATCTCTTGAAAGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269570.1	2.4e-136	LOW QUALITY PROTEIN: putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	1.5e-122	Cold-responsive protein kinase 1
trEMBL	A0A5P1ELQ0	1.7e-136	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	64.94	9e-127	449		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g66594	AT1G16670.1	328	113	1	15	340	13	340	64.94	9e-127	449
g66594	AT3G09010.1	336	162	4	2	334	4	337	50.30	3e-96	348
g66594	AT1G53430.1	310	137	3	13	320	630	938	54.84	1e-92	337

Ortholog group

Species	Genes
Allium cepa	g124499.t1; g333320.t1; g366430.t1; g536661.t1; g66594.t1
Allium fistulosum	AfisC1G03109; AfisC1G03647; AfisC1G03650; AfisC2G09370
Allium sativum	Asa6G00356.1; Asa7G04946.1; Asa7G04948.1; Asa7G04958.1
Arabidopsis thaliana	AT1G16670.1
Oryza sativa	LOC_Os02g06930.1; LOC_Os02g06930.2; LOC_Os02g06930.3; LOC_Os02g06930.4; LOC_Os04g52840.1; LOC_Os04g52840.2; LOC_Os06g46330.1; LOC_Os08g10070.1; LOC_Os08g10070.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	46	312	155.0	2.1e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network