Detail information of g77027


Location
GeneChrStartEndStrand
g77027Scaffold_34929:HRSCAF_35061614842254+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGF36555.13.8e-66nuclear transcription factor Y subunit B-3-like protein
SwissprotO23310.18.8e-52Transcriptional activator HAP3C
trEMBLM1LJZ02.7e-66Nuclear transcription factor Y subunit B-3-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G14540.172.506e-57 217NF-YB3nuclear factor Y, subunit B3

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Ortholog group
SpeciesGenes
Allium cepag15027.t1; g210431.t1; g279559.t1; g279560.t1; g325255.t1; g325257.t1; g333453.t1; g334246.t1; g490269.t1; g77027.t1
Allium fistulosumAfisC2G01378; AfisC7G00269; AfisC8G00803
Allium sativumAsa0G04322.1; Asa1G04541.1; Asa3G04699.1
Arabidopsis thalianaAT2G37060.1; AT2G37060.2; AT2G37060.3; AT2G38880.1; AT2G38880.2; AT2G38880.3; AT2G38880.4; AT2G38880.5; AT2G38880.6; AT2G38880.7; AT2G38880.8; AT3G53340.1; AT4G14540.1; AT5G47640.1
Oryza sativaLOC_Os01g61810.1; LOC_Os01g61810.2; LOC_Os03g29970.1; LOC_Os05g38820.4; LOC_Os05g49780.1; LOC_Os07g41580.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain5612096.48.1e-28

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08065NFYB, HAP3; nuclear transcription Y subunit betaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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