result

Gene information

Detail information of g84342


Location
GeneChrStartEndStrand
g84342Scaffold_36152:HRSCAF_37031515228701523477+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_011028710.11.1e-28PREDICTED: homeobox-leucine zipper protein HAT5-like
SwissprotP46668.11.2e-14Homeodomain transcription factor ATHB-6
trEMBLA0A835D4Z58.8e-31Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G01470.150.001e-25 112ATHB-1;ATHB1;HAT5;HB-1;HD-ZIP-1homeobox 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag103561.t1; g121794.t1; g13156.t1; g190300.t1; g199438.t1; g252539.t1; g324522.t1; g361130.t1; g41153.t1; g492566.t1; g55488.t1; g59663.t1; g84342.t1
Allium fistulosumAfisC1G01481; AfisC1G02424; AfisC1G02864; AfisC1G05033; AfisC1G05156; AfisC2G01313; AfisC2G08452; AfisC3G00906; AfisC3G02637; AfisC4G00626; AfisC4G02622; AfisC4G06244; AfisC5G05451; AfisC6G01716; AfisC6G02991; AfisC6G04767; AfisC6G05728; AfisC7G02966; AfisC7G02969; AfisC7G04763; AfisC8G01572
Allium sativumAsa2G00783.1; Asa3G02473.1; Asa4G00625.1; Asa7G01405.1
Arabidopsis thalianaAT1G27045.1; AT2G22430.1; AT3G01470.1; AT4G40060.1; AT5G65310.1; AT5G65310.2
Oryza sativaLOC_Os08g37580.1; LOC_Os09g21180.1; LOC_Os09g29460.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02183.15HALZFamily579845.17.8e-12

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006417Pregulation of translation
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0009314Presponse to radiation
GO:0009416Presponse to light stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009637Presponse to blue light
GO:0009651Presponse to salt stress
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009893Ppositive regulation of metabolic process
GO:0009965Pleaf morphogenesis
GO:0010016Pshoot system morphogenesis
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010608Pposttranscriptional regulation of gene expression
GO:0010628Ppositive regulation of gene expression
GO:0010629Pnegative regulation of gene expression
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0017148Pnegative regulation of translation
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032268Pregulation of cellular protein metabolic process
GO:0032269Pnegative regulation of cellular protein metabolic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0034248Pregulation of cellular amide metabolic process
GO:0034249Pnegative regulation of cellular amide metabolic process
GO:0042803Fprotein homodimerization activity
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051248Pnegative regulation of protein metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905392

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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