result

Gene information

Detail information of g85492

Location

Gene	Chr	Start	End	Strand
g85492	Scaffold_36277:HRSCAF_373541	60310	61538	+

Sequences

CDS

>g85492.t1
ATGAAAGATGATCAGTCAAATGACTCAGAAGATATAAAAGTAGATTTGACAAATCATTTTACAACCGATGAAGAATACGATTCACAGAGCACATTGATCCGGTGGTGTAAAACAACAGGGAAAAAGTTGAATACCATTGTAGTAATTCTAAAGTCCGATAAATTAGGGCCAAGAAGAAAACCAAGGTTACAGCTGGGGTGCGAAAGGGTGAAAGTTTATTGTAGTCATCAGCCAAAGGTAGCAAAAAAGGGAAACACCATGAAACAACCTAGAGCTAGCGCTACTAAAAAATGCAATTGTCCATTTCGATTGAAGGGGGTGTATGTAGATGAAGACAAATGGAGAATATTTGTAATCAATGGAGTGCATAATCATGAACTTTCTCACTCTTTAGAAGGACATCCGTACGCGGCATGGTTGATGGACATGGAGAAAGCAATCTTAGAAAACATGAGGGTTGCAGGCGTTCCTCCAAGAGAGGTATTAGTTACCATTAAAAAGTCCTTTCGAGAAAGTTCCTCAACTTTGAAGACTATCTACAATGCTAAATATAAAATGCAACTGTCAGCGATGGAGTGTAGATCCGCGATGCAATATTTAATGAAATTGCTTACAGAGAAGCATTATGTGTATTATGATCGGACTGATGCGGTAACCGATCATTTGATAGATATAACGTGGTCTCACCCGAAATCGTCTGTATTATGTAAGTGTTTTCCATCAACCCCTTTGCTTGATTGTACACATAAAATGAACCGGTATAATATGCCTTTGTTGGAAATGGTTGATATAGGTTCTATGGGTCGAACATTTAGTATTGCTCATGCATTTCTAGCACACGAGAGGGAAGAGAACAACGAATGGATGCTAACGAAGTTAAAACATTTTTATTTACCAGGTAAAGAACCCGAGGTAGTAGTTTTCGATAGAGAATGGGCGATGATAAATGGAATCAAGAAAAAATTTCCATGGGCAAAGTTGATGATGTATTTATGGAACATGGGAAATAATGTCATTATAAATTGCAAATCGGAGTTTAAAACAAATGAGATTTTTGGGATATTTTTGCAAAGTTGGAAGAAGGTGGTTCATGCACCGACTGAAGATGAATTTTGGATGTACTGCAATGATTTTCAAAATGATTAG

Protein

Gene

>g85492.t1
ATGAAAGATGATCAGTCAAATGACTCAGAAGATATAAAAGTAGATTTGACAAATCATTTTACAACCGATGAAGTATTTAGTACTTAATTTACAATCGCTAATGTATTTATAAAAATGAAGTATGTTAATTTTTTTATTAAACTATGTGATTTCAGGAATACGATTCACAGAGCACATTGATCCGGTGGTGTAAAACAACAGGGAAAAAGTTGAATACCATTGTAGTAATTCTAAAGTCCGATAAATTAGGGCCAAGAAGAAAACCAAGGTTACAGCTGGGGTGCGAAAGGGTGAAAGTTTATTGTAGTCATCAGCCAAAGGTAGCAAAAAAGGGAAACACCATGAAACAACCTAGAGCTAGCGCTACTAAAAAATGCAATTGTCCATTTCGATTGAAGGGGGTGTATGTAGATGAAGACAAATGGAGAATATTTGTAATCAATGGAGTGCATAATCATGAACTTTCTCACTCTTTAGAAGGACATCCGTACGCGGCATGGTTGATGGACATGGAGAAAGCAATCTTAGAAAACATGAGGGTTGCAGGCGTTCCTCCAAGAGAGGTATTAGTTACCATTAAAAAGTCCTTTCGAGAAAGTTCCTCAACTTTGAAGACTATCTACAATGCTAAATATAAAATGCAACTGTCAGCGATGGAGTGTAGATCCGCGATGCAATATTTAATGAAATTGCTTACAGAGAAGCATTATGTGTATTATGATCGGACTGATGCGGTAACCGATCATTTGATAGATATAACGTGGTCTCACCCGAAATCGTCTGTATTATGTAAGTGTTTTCCATCAACCCCTTTGCTTGATTGTACACATAAAATGAACCGGTATAATATGCCTTTGTTGGAAATGGTTGATATAGGTTCTATGGGTCGAACATTTAGTATTGCTCATGCATTTCTAGCACACGAGAGGGAAGAGAACAACGAATGGATGCTAACGAAGTTAAAACATTTTTATTTACCAGGTAAAGAACCCGAGGTAGTAGTTTTCGATAGAGAATGGGCGATGATAAATGGAATCAAGAAAAAATTTCCATGGGCAAAGTTGATGATGTATTTATGGAACATGGGAAATAATGTCATTATAAATTGCAAATCGGAGTTTAAAACAAATGAGATTTTTGGGATATTTTTGCAAAGTTGGAAGAAGGTGGTTCATGCACCGACTGAAGATGAATTTTGGATGTACTGCAATGATTTTCAAAATGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026413122.1	1.7e-76	protein FAR1-RELATED SEQUENCE 5-like isoform X2
trEMBL	A0A4Y7K9W9	1.3e-73	MULE domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	20.15	3e-10	63.2	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g85492	AT4G38180.1	273	180	6	83	334	135	390	20.15	3e-10	63.2

Ortholog group

Species	Genes
Allium cepa	g102170.t1; g139819.t1; g156125.t1; g171264.t1; g172179.t1; g205250.t1; g218949.t1; g259799.t1; g265035.t1; g278196.t1; g286549.t1; g297027.t1; g334068.t1; g369023.t1; g374901.t1; g436126.t1; g44488.t1; g461480.t1; g461495.t1; g470844.t1; g473862.t1; g477407.t1; g63925.t1; g71021.t1; g79478.t1; g81586.t1; g82881.t1; g85492.t1
Allium fistulosum	AfisC1G02647; AfisC8G00992
Allium sativum	Asa2G05662.1; Asa2G05667.1; Asa3G02561.1; Asa3G04439.1; Asa5G00572.1; Asa5G04105.1; Asa6G04377.1; Asa7G02505.1; Asa7G05001.1; Asa8G05720.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08731.8	AFT	Family	76	127	26.4	6.4e-06
PF10551.6	MULE	Domain	244	336	58.9	4.8e-16

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network