result

Gene information

Detail information of g87907

Location

Gene	Chr	Start	End	Strand
g87907	CHR2	74606797	74610041	-

Sequences

CDS

Protein

Gene

>g87907.t1
ATGAACCAAGCAAGCATCTTTATTGCAAGTTCAGAAAAGAACTCGATGTTTTTCTCCATGCCAACATCAGTCATAGCATTTCATCATATGCTACATGAACCACATAATACTACTACTCTTTCTTGGTCTCAGTGTATGTCTATTGCATATCAAATAGCAATGGCTTTGAAGCATCTACATGAACACTCTGACCTTCCAATTATTCATGGAGATGTGAAAGCTTCTATTGTTCTTGACCAAAATTTCAATCCAAAACTATGTGATTTTGGATCTGCACGGTTAGGATTTTATGACATGGTTTCTTGTTCAGTTAACCATAATAGCATGATGATAGGATCTCCAAGTTATACTGACCTAAGTTACTTTCATTTGGGTTTGGCTTCAAAGAAAAGCGATGTGTATGGTTTTATGGTGCTTGCTTTAGAGCTTATTACTGGAGTTGAACCATTTTCGCCAAAGAACTCACAGTTATTAGCGACCATGGTCCGGCCTCAGTTGAAGCTTAACTCGTATGGAATGAAAGGATTATGGAATATGATTGATGTTTTGCTGGGCAAAAAATACAACGTGGAAGAAGCCGTGGGTTATGATGAAGATTGAGAGAGATGCACTGGAGAAAACTCAACTCCGAGATTGTCAGTTGGTGAGGTGATGAAAATCACGAGAGATAATATGTCATATTCCTTACAGTAATCCATACTAGTGCACTCACAAGCAGCGGTTTTAAAGATTAACTTTTGAGAACGATTCTTGCATGGATGAAATGTTTAGAAATTATGGAAAAAGAAACTTGAATTCTACTTTAAACGATACCTCTCTAGCGAGTTTCTAGGATTCTAAATTACAACATGAATTATATTTATGTACTAGATTAATGTCAGAAAAATTATATGCAAACATATGTCGCACCATCATTTATAACCAGGTGGAAAATATACTTGTTGCAAAATTGAATAATACTTAACACGGGTATGAACTAAAATTACAAAGATGACTAAAATAAATGGAACAAATATCATTAGAGCAATTTATACTTTTATTACTCAAGTTTGTACTCATAGTTATAAAAATAAAATGATGTCATTCTATAGGCGAGCACAATCGGATAACAGAATAAATCGGTTAATATTTTCGGTTAACCACAAAATTAACGTGGTTCAGTTAACCTGTAGTTGGTTAATTTCGGTCGAAGTCTGCCGATCGAACCAGTTAATTTTAACCATGGTTAACCAAACTATTTAACCGATTAACCGAGTAATATAAACGGTTAACCATTTACCGGTTAACCATTTATATTAATTGGTTAACTTGTTAAATAAACCTTTTAACCAATCGCATATATAATTCAAAGTCTGCATGCATAATTCAAAACTGCATACATATGTAACCTAAATTGACACTACAAGCATAGAAATTCAAAGTTTGCATAGACCATCACTACAAGAAAAGTTAGTTATAACAACACAATAATATAGTCTACTTTTGTAAAACCACTGTTTTATGTTTAATTCAAAAAAAAAAGAAATTGTTATCTATTGTCAACCAAATTTTACATGGCGGGAACTCTAATATTATTTTGAAGATCAATTCTTATGTCCTTAAAATTGTGTGCTCACTGTCTCCGCCAAATTTACATCATTCATTTTGAAAGTGGGACCTGCAAATTTATTTTACAAGGAGATAATGAATGGTTGTGATTTGAATGGGTACATAGTATACCTAGGTCGAGACAGAGGAATTCATAGGCACCGCTATGTTTTTCTAGTTACATCTTCCCTCAAGAGCAAAGAAAACTCTGAAATAATTTCTCCTCGTTTTCTCTTCATCTCTTTGTAGCATTGTTCATCCTTCACCTCAAGCTCTACACTGTAACTTACTTCCTCGCACAACCCAAGGTTTTGTATGAAGGCCATACCAAGATTCTTTTTACTTTTGGTTCCATATCATAGGAAAAACCCTAGATGAAATTTGCAACAATTTGCTAGTTGTCAATAGCTCTCTACTGCCACCTTATGAACAGCTCCTCATCGCCAACTCAAGTAAGAATCTCCACCTTTGATTTCAAGCGAATTTTGAATTTGAAATTCATTCCAATTAAAAAAATTTGATTTCCACTTCAAAATTCCCAGCTGATTTTGGGATTTTGAAATCATGTTTTTACATTTTCCTGATATGAAAAATATTCACTTTTCAATTGAGTTTTTGGTCAAACAAATTACGGTTGACTTGCCTAAAGGAGAGAATACGTTTTTTGATGGTTGGTCTTGATACAGCTGGTAAAACTATGATGTGTGTTCAGTTTCGGCATTCCCGCGTACCGTACGCGTTCGCTTCACCGTGTCTATGGGAGTCAACGGTCGAAGTCTTCCATGCCGGCGTCCCGATTGAACATCCCTTCATCGCCTGCCATCGGGCATATAATATGGTCTTGGCAACACATTGTAACAAAAGGAATCCCTAATGTTACGTGCCACTAATCCCATATATATACCACGATTATTCTGAATATCCTTCGATGTGGGACTTTTTAACCATTCAATCCACGCACCCACTCTATTTATAATGCGAGCCACACCTAACAATGTGCATGTTGAATCGCCACTATTATGTGTAATTCATTCATATTCACAAAGATTTGTTATTTTTCTAACAGATTGTTAGTTCTTTTACACCAAGCAATGAATGCTTCTTTTAAGAATTCATATGGCATGTTAGATAGTCTATACAAAGGACTTTCTGTAACAAGTGATGAAACAAAGCTAACGGGTAGGCTTATTATAGCATCTATAGCGTCAACTGTTATGAGTGTAAGTGAAAAGTTTTTGAAGTATGGTATTTCCTTCTCTGACATCGAGAGACCATTTTTCATGTCTGATTGATAATGAGTTTGCTAGATAGACCCTTGCTGGTGTGAATGTGGTGTCTATAGAGAGATTAAGCGAATTTCCCATTGTAAGCAAATTGGATCCAGCAGCGTATGGTCGTCCAGAGTTGCAATAACTAAAGAACTCATTGAGCATGAGTTGAACGGAATGAACCTAGAAGAGACAATGGAGAGTAACAAACTGTTTATACTAGACCGCCATGATTTGTTCTTGCCATTCATCAAACAAATAAATTCATCAAAAGAGAGAAAAGGTTATGCTATAAGAATGATATTTTATCTAACAGATAGAGGGCTTAGACTAATAGCAATCAAACTTAGTTTGCCACCTCATCCTTCTAATTCATCAAGGAAAAAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259553.1	1.7e-32	probable receptor-like protein kinase At4g10390
Swissprot	P0DKI6.1	4.0e-26	Probable receptor-like protein kinase At1g33260
trEMBL	A0A5P1F7K7	1.3e-32	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G33260.1	47.66	1e-28	123		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g87907	AT1G33260.2	128	58	2	40	158	135	262	47.66	1e-28	123
g87907	AT1G33260.1	128	58	2	40	158	136	263	47.66	1e-28	123
g87907	AT4G10390.1	137	74	2	33	164	127	263	42.34	7e-28	121

Ortholog group

Species	Genes
Allium cepa	g174546.t1; g174550.t1; g205731.t1; g255096.t1; g255102.t1; g513048.t1; g513054.t1; g513060.t1; g513063.t1; g513066.t1; g513070.t1; g513094.t1; g513098.t1; g513100.t1; g54185.t1; g7577.t1; g7584.t1; g87896.t1; g87897.t1; g87901.t1; g87907.t1
Allium fistulosum	AfisC2G07209; AfisC2G07210; AfisC2G07211; AfisC2G07212
Allium sativum	Asa6G04372.1; Asa6G04373.1; Asa6G04374.1; Asa6G04375.1; Asa6G04381.1; Asa6G04383.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	19	161	53.0	2.8e-14
PF00305.16	Lipoxygenase	Domain	252	282	22.2	3.8e-05
PF00305.16	Lipoxygenase	Domain	283	333	37.4	9.5e-10

Gene Ontology

Accession	Ontology	Name
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009611	P	response to wounding
GO:0050896	P	response to stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network