result

Gene information

Detail information of g90639

Location

Gene	Chr	Start	End	Strand
g90639	Scaffold_36924:HRSCAF_389401	170806	179034	+

Sequences

CDS

Protein

Gene

>g90639.t1
ATGATGCAGCAACAATTTGTTTTCTTAACCATCATTTTTTCCTCTCTGATCGTCGGCAGTTTTTCCAAGTCAAACACCATAAGCCTTACTCAACCTCTCCCTTATGGCAAAACCTTAGTTTCTTCAGACAAGACGTTTGCTTTGGGTTTCTTCACTCCTACTACTGATTCCAATAAGCATTACCTTGGTATTTGGTACAATAAAATACCTACTCAAACCGTTGTATGGGTCGCGAACCGTGAAAACCCAGTTCACGGTAGGACAGGCTTACTATCAATCAGCGATAATGGCACTCTCTTGATTACCAGTGGAAACTCAAATGTCATTTGGTCATCTTCTTCATCGTACTCAAATGTTATTACTGATCCTGTAGCTATGTTGCTGGATTCTGGCAACTTTGTTGTCACCAATGGTTATGATGAAAACAACTTTTTTGCCTGGCAGAGCTTTGATTACCCAACTGATACGATTTTACCAGGAATGAAACTTGGCTGGAACCTAACAAGTGGGCTCAATCGCAACCTGACCTCATGGTCCAGCTCGTCAGATCCATCTAGAGGTAACGTCACTGTGGCTGTGGACCTTAGAGGCGACCCACAGTTGATATTCTGGGCTGGGTCGACCCGTAGGCTTAGATCCGGTCCATGGACCGGGCAGTACTTTAGCGGGCTGGCACCCTATAAACCCGATCTCAATAATGTCTTGATGTTGAACTTTGTGGACACGAAGCAAGAAGTTTACTTCACTATCGAAGCAATCAACACTTCTTCGATATCTAGGCTTGTATTGAATTCTTTAGGGGTGTTGCAACAATTTGTGCTATTGAATTCGGGTCAGTGGGGTTTGTATTGGTACACACCAAGGACTCAGTGTGACTCGTACCTTGTTTGTGGGCCATATGGAGCTGGCTGCTATGTGGATGGATCACCAATGTGTAGTTGTTTACCGGGTCATACTCCCAAAAATACGGGTAATTGGGCTTTGAGGGACTGGTCCGGAGGGTGTGTTAGAAAAACAAAGTTAGACTGTAGGAATGGAACAGATGACTTTGTGAAGGTGCAAAGGACGCTTTTGCCAGACACTGTGAGTGCAACTGTTAATTCAGGTTTGAGTTTGAGCGACTGTAGAGATGTATGTTTGAAAAATTGTTCGTGTACTGCATATGCTAGCGCCGATATCCGCAATGGTGGAAATGGGTGTATATTATGGTCAGCTGAGCTTTCTGATATTCTGGTGTATACTAACGGAGGCCAGAATCTCTTTATGAGATTGGCAGCAGCAGATTTAGGTATCTACTTTTTGTTTGATATGTACATATGCTTGTGTTTACTTATGATAGAAAGTTATCAGTCTGCCTGCCCATTCCATTAATATGGATAATTCGTTATAAATCATGTAGTCATGTGATGTTACCTAGATGATTCGCTATAAATCATGTACGCAATTAGGGTGCTCATGAAGATACATTTTCTGATTTGATTTTGGTGCTTGCGACCAATTTCTAGCAGACAGTTAATGGAGGTGAGTTTACATCCAGTGTCCAACATAAGTTTACATTGGACACAAGGCGATGATAAAATTGTATGCGCAATGGGGCTTTAGTCCGCACTTTTGTTTATGTTGGAACATCAAATCTATTCACTATAAAGATCTTTGTAGCTTTCCTGAACTGAATGTATACTCATTTCCGTTATTGCTGCACATTTTAAAATCTCTAATATTAACTCGTGTCATGTTTAGGGTTGTAAACTCATGGAGCTAAATTGAAATACCAGATATATTAAGATAGATTTCTGCTGGAAATTTGTTATGCGTAGCAATTGTGAAAATAAAGTCTGTTTGACCACTTTAAATTTCTTGTTGGTTTGACCATACATTATTCTTGTGCTCTGTAGTGTTTTTGTATTTCCAGACAGAAATAAGATAACTATTATCATGGTGCAAGTTGTGCAGAATATTATAATAGTATTTAATCAGTTAAATGACATAACGATTCCCATGGCCTATTTGCTTTTAAATATGAAATAACCTAATAAGCACAACCTGTCTATTTAAATGTATGTACTGTAGTCCACTTTTCTGTTAAGTATCCTCTTATCTTCAGAATTTTTTATCTTCTGTACCATAAATCTAGTTTCGGAAGGCTTGCAGCCTCATCTGTATATTTCCTTTTGTAACTTTTATTTACATGTCTGCATGTGTACATATTAATAGAATATATAAGAACTGAAAACAGAGTACAAAACGTTTGCCCAACTATGTTCCTGATATAATTGCTAAGCCTTACCCCCTTTTAGGCAAGGTTATACGCTGCCTGTGGACTTTTCATCTCCAGAATCACTATATAATATCATTGGTCGATAAGTAAAGAAAATAACATTACTAGCTACCACCTTATCATTTCAGCTGTACCACGAGATATAGAAATCTATGATTAGTTTTAAGTTTTGTTAAAAAGATAATTTAATATCTGCACTCTTTTCCCTGATGTGTGCGTTAGCATTCTATTTTTGACTTATAGTCTCTTTCACAACAACCAGCACTTTGACCGCTTGCCAATATTTCAGTGGTCAAAGATATATCTCAGAATTCTCAGTGTTGCCTTTAATTAGGAAAATATATACCCGTTCACCATTGTTGTTGAATACTGCTTATTTAATTAATTATTTAAAAAACTTATACCATGCAGTGGATGTAATCAACAGGTTTACCAAGTTCAAACCAAGCTCATAAGAAAAGTAATGCAACCATAGCCATAGTGTTTTGTTTAACCTTGGGGATGTTGATAATAGTAAGTATTGTTCTCTTTGCCTGGAGGATGAGGAGGAGAACCGGAGGTACTATGCCGAATATTGATTTGTTTCGAACCAATTAACTTGAACATGCTCCTACTTAAATATTTATCACTCTACTTGTGTATAGGCAGTACCTTCAGTGGTGAAAATGTTGCGGAGAACACCGGTGAGGATGAAATGGAGCTACCGCTTTTTGATCTGGAAACTATAGTTGAAGCAACAAATGACTTCTCTGACAAAAATAAACTTGGAGAAGGTGGATTTGGTCCTGTTTACAAGGTTAAACTTCAACATTGACCAATTTAGTTATTTAACTTTTCAACCTTTTTGTTTTGGATAAATGTGTGAATTCTTCTATAATATCGTTATCGACTTTCTTGCAGACTTGTATATCTAAGATAGAAGAACATAAATTATGTTAAATGATCTGTGATATTGCAACATATAATTTCCTTTGTTGAAGTTAAAGCTAGAAATTGCTTTTATATTTTCCAATAACTTTTAAATGTCGAATGAGTATGCTTGTTTGCCGTATTTAGGTTTCTTTAATGCTCTATAATTCCTTTCATATATTAGTTTGCATGTAGTTTATCCTGTTACGACGTCATTTCTTAAAGTAAACACTAATATCTTGATGGTGGAATTATAGGGAATAGCGAGGGAGGGACAAGAGATAGCTGTGAAGAGACTATCTAAAACATCATCACAAGGTTTCGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGGCTGAACGTTCATTCCTCTATTGCTACCAGGTGGCTCGGATGCCCCCATCTCACTTCCCGGGGTTGGATCAACATGCTCTGCGTGAGTGCCCCCTAGTTCTGGTGCTGCGCCAGATGGTCCTGCTCCGTTCTGAACCCAGTTGCTCCTTGGATTTGTGCTCCAATTTGCCCAATTTGTTGAAGTAAGTTCTGGATCATCTCTTCTTGTCTTCTCATCATGGCCTCCATCTCATCCCTAGTGATGAAGATCGATGCTTGATTCCCTCCTGAGGAAGCCTCTTGACTTCCTTGGTGTTCACTTCTCTCTGGCCTTTGCCTTCTACTTGTTTGTCTCGTCATAACTCTTAGATCTGAACTCTTAGATTTTCAAATTCAACTTCTATCCGATGTAGCGGAAGCTGGTTTCTCAGTGAAAGCACCAAAATGTTTGCGTAAAAAATGGCCGCAAACACCCAAAGTCGTATGAGTTGGTTGATTTTATGTTGTTTTTAGTGATTTGGGTGATTTATGCAAATATATAAAAAGCAGGGACTAAACTGTAAAAGACACACAGATTTATAGTGGTTCGGCCAGAACGTGCCTACGTCCACTTTATATGTTATTCTCCTTTTTTCCTTCAGATTACAAGTACAAAGCTTTGATTACAAGTATCTAAAGTTGTTTGAGAGTTCCTTCCAGGCTTGAGCTCTCAAACTTGTCTGCCATTGTTGTACCCCTGCCCCTCTATTTATAGAGTGAGGCTGGGGGCAGGGGTCTTGGATGTTTATAGCTGCTGGTGGACCTGGGCTGATGCAATCTGGACTGGCAACCTTGGTTCGGCGTTCCTTGGTTCGGCCATGTGGAGAAGGTTGGATCGGTGTTGGTGGAGTGAGAGCTTGGTCTGGTGGTATGTTGTTCGGTGGAGCATGGAAGTGGAGCTTGGTTCGGTGGTAAGGAGAGGTGGTTGATTCGGCTATGTGGAGAAGGGAGTTGGCTTGGCAATGCTATGGACCGGCGTTGGTGGAGTGGGTGCTTGGTCCGGTACCGAATGATCCGGTACCGAATGGGTTGAAGGTGTGTGCTTACCGGATGAGTTTAAATGAGATGGATGGTGGTGACTTCTAGTTGGTTCGGCAGGGAGGGGTATGCCGAATGAGCTCTAGAAGTTTGATATGCTGGATGAACCAAGGGAGTAGGGAATGCCGAATGAACATCTGTAGTGCCGAATGAGCTCTCGTATGGCTTCGGCCGAATGAACTTTGATATTTGATCCTTGCGTGAAACCCCTGACTTATGTACGCTTGCTTGCTTCTTCTTGTTCCGGTCGTGGTGGAAATGCATACAACATTGATATTCCGGTTTTGTCCAAAAAATGGGATAACAGGTTATAATGTTTAGTATGGCGATTTCATCTATCGGATAAAAGAGAAAACTAAGCAAATATATGGTTAAAACGATATCTATCTTACTACTATATCCTTAACTAAGAAAACTGATATATGGTGTTTTTTCTCTCCAAAACGTCTGTCAGTCTACGAATATGGATATTAAAGCTAATTAACACTAGAATGAGGGGGTAAATAATGTTTAATTGATTATATAAATATTTTTCAAATTCTTTAAGATTTTACTTAAAATGATGTAATTAACCATCATACAAACAGTTGCAAAATCGAAGTATAGATAAAAGTAAACACGGTAAAAGTAAAAGGAAAGAACACACTAGAATTTTATAGTGCTTCGGAGTTACCCTACATCCTGTCCCACAAAATTCCTTGTATGGATTTCTTTTCAACTAGTAAATGCAAATACAATCTCGATTTCAAGGCTATGAGACACACTCTCAAAAATACTGACATCTAAGTAGAGTCACTTGATTTCTGGGTCATAAGCACACCCACTAGATTTACATGCTACTAAGCACACTCGGTTGATTTTACATGCTACAATCACACCTATATGGATTTCAGGGATACCAAGCACACCACAGAGTATGATTTGATATAGTTTGCAGACTCGGATCTTTCATCTTGATTACTATTGATCCTATAACTTTGAATAACACTTTGGTCTTGATAGAGATAAGCGAAATCAGAGAGTAGATGAAGGAGAATCAAATTAGTAATAATTGAATTTGATTCTGGTTGACTTTCGGCAGAGTATCGATGAAACAAATGAAGAAGTTTAATCCAAATATAACTTAATAAAACTTTATAAAATAATTTTGAAAGATTTAATAAGAATATTCAATACTATTATAAATATATATATATATATGTGTGTGTGTCAATATAATTATAATTTATTAAAACAGAAACAAAAAATCAATATATATGTAAACTTAAAAACATTAAAATGATATCTTTATTGAAAATCATTTTGGAAAATATTTTGAAAAGATTATTTTAGAACTAGAATAATTGAAAAACAATTTAAAACAAAATTTAGAGAATGCGAGAGAGATCAGGAAAGTGCTATCAGGTTTTAACATAAATTCTATAACTCTATAACTTATCCGGAATATCTTAAAATAGAACGCTTCAATACCCATGAGCCTTCAATCTTGAACTCTTAAAACTCTATATCAGCATCTTGAATCTACTCTTGATACTGTACGGTCTTCTTAATCAACACCCGTCTAATATCCTGCATATATACTATATATATCTTGATAAACAATAATATCTATATTTTATATAATGTCCTTTAGTTGTTATCATCAAAACTAATACCTAAGGTACTAACAACGTCAAATTAGTTCTCTTCTTCATTGTGCGATCTGTAAAGTGCACAATCCTCTTTAGTTCAAATCTCTTTGGATTTTTGAATCCAATTTAAATTCATGTCCAAGCGTGATCCACTTTTAATTTGAGAGGTGGATTTAGACCGTGAATTTCAAGTGTTCTTTCTTTTGGATGTGATGAATTTTAACATTTATTTTTATTAAGACGTTAAAGAATAAATCATTATATTTCAATATCTGTGCTTTTCAATGCTACAATTGTTTTCTTATTATATAGTTACTTAATTAATGTGGCTATAAATAGATGGTCATGAACTGTATTGCCATCATTAAGAAGTAATGACTTATTCATATATTTAATAAATTTATTCTACAATTACCTTTAATATGGTGTCGAAGTAAGGATTTTTCTATCTTTTGTTTTTTGGTTTTCTCTCCACCTGCTTTAACCTCTTCTTTCTCCTCTCACAAGAATAGTCTTCATCGACTAAAACCCACCACTAATAATCCAACTCCCATCACCTGAAACTCACCTAAATCCATGTTAAAACTGGATTAGCCTGCAGCAAAAGTTATAGGTGAATTCAAAATAATTTCCCTTAATTGATTTATAATGTGTCTATGAAGTCTGATTCATTTACAACATTTCTAAATTTTTACTTAAATCACATCTCTTGTTTTATTTAAATTTATAGCATTTGATTTAATCTATATTCAATTAAATATATAAGTACATATGAATTGTAGTGAAAAAATAGAGTTTTAGGCAACGGAAGCAGAACACCCAGTAATCTAGTCCGTGGACAATCTCAACAATTCCAATTGAACAAAGAGAATAAAAAGAAAATAAAAAAGCTTAAATTATATATAAAAGACAAAAAGGAAAGATCACACCAATATAACGAGGTTCAGCTATGCCTACATCCTCGGACCCAACTACCTTTGTTCTTATTCACTTCAAGTGGGAGTACAACATGAGAAGACTATAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK74671.1	1.7e-181	uncharacterized protein A4U43_C03F8930
Swissprot	O81832.4	6.7e-114	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
trEMBL	A0A5P1FDI7	1.2e-181	Non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	40.40	5e-116	415	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g90639	AT4G21380.1	547	289	11	24	545	29	563	40.40	5e-116	415
g90639	AT4G27290.1	554	284	9	7	556	9	513	39.17	2e-112	403
g90639	AT1G65800.1	555	295	12	15	545	24	560	39.28	2e-107	386

Ortholog group

Species	Genes
Allium cepa	g275833.t1; g90639.t1
Allium fistulosum	AfisC2G00008; AfisC2G00014
Allium sativum	Asa5G00182.1; Asa5G00187.1; Asa5G00189.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	72	181	107.3	3.4e-31
PF00954.17	S_locus_glycop	Domain	212	322	84.6	6e-24
PF08276.8	PAN_2	Domain	343	410	74.8	3.7e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network