Detail information of g90843


Location
GeneChrStartEndStrand
g90843Scaffold_36960:HRSCAF_390126116997+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020258905.11.1e-17protein indeterminate-domain 12-like
SwissprotO22759.26.1e-08Protein indeterminate-domain 12
trEMBLA0A5P1FDR18.2e-18C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G02670.135.193e-1270.1AtIDD12;IDD12indeterminate(ID)-domain 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag139161.t1; g307190.t1; g421878.t1; g466583.t1; g90843.t1
Allium fistulosumAfisC1G02792; AfisC2G02955; AfisC3G03342; AfisC5G01276; AfisC6G00311; AfisC7G03397
Allium sativumAsa5G02884.1; Asa6G06129.1
Arabidopsis thalianaAT1G03840.1; AT1G03840.2; AT4G02670.1; AT5G44160.1
Oryza sativaLOC_Os01g09850.1; LOC_Os01g09850.2; LOC_Os01g09850.3; LOC_Os01g14010.1; LOC_Os02g45054.2; LOC_Os02g45054.3; LOC_Os02g45054.4; LOC_Os10g28330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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