Detail information of g92401


Location
GeneChrStartEndStrand
g92401Scaffold_37186:HRSCAF_395420486101493876+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020586554.11.4e-42transcription termination factor MTEF1, chloroplastic isoform X1
SwissprotQ84X53.24.5e-25Protein SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10
trEMBLA0A7I8LB751.7e-37Uncharacterized protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G34620.153.944e-44 175Mitochondrial transcription termination factor family protein

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Ortholog group
SpeciesGenes
Allium cepag124743.t1; g169518.t1; g201158.t1; g205183.t1; g277401.t1; g325175.t1; g38755.t1; g529407.t1; g531744.t1; g69218.t1; g92401.t1; g9460.t1
Allium fistulosumAfisC1G04395; AfisC2G07120; AfisC5G04232; AfisC5G07017; AfisC6G06893
Allium sativumAsa0G03179.1; Asa1G00639.1; Asa2G01696.1; Asa2G06485.1; Asa3G00403.1; Asa3G02212.1; Asa4G05530.1; Asa4G05532.1; Asa5G03415.1; Asa6G02699.1; Asa6G03304.1; Asa6G05632.1; Asa8G02987.1; Asa8G02988.1; Asa8G05099.1
Arabidopsis thalianaAT2G34620.1
Oryza sativaLOC_Os03g57149.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02536.11mTERFFamily6418853.12.1e-14
PF04782.9DUF632Family26233982.23.6e-23

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15032MTERFD; mTERF domain-containing protein, mitochondrialEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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