result

Gene information

Detail information of g92875


Location
GeneChrStartEndStrand
g92875Scaffold_37255:HRSCAF_397181417315434108+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267206.10.0e+00histone-lysine N-methyltransferase SUVR5
SwissprotO64827.33.2e-207Suppressor of variegation 3-9-related protein 5
trEMBLA0A5P1ER730.0e+00Histone-lysine N-methyltransferase SUVR5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G23740.141.550.0 723SUVR5nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag264710.t1; g532450.t1; g92875.t1
Allium fistulosumAfisC6G02631; AfisC6G02644
Allium sativumAsa8G04076.1; Asa8G04077.1; Asa8G04078.1
Arabidopsis thalianaAT2G23740.1; AT2G23740.2
Oryza sativaLOC_Os02g47890.1; LOC_Os02g47900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF11722.5zf-TRM13_CCCHDomain66869525.95.6e-06
PF05033.13Pre-SETFamily1472159445.39.9e-12
PF00856.25SETFamily1613173270.51.9e-19

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003824Fcatalytic activity
GO:0005488Fbinding
GO:0016570Phistone modification
GO:0006325Pchromatin organization
GO:0006338Pchromatin remodeling
GO:0006342Pchromatin silencing
GO:0006355Pregulation of transcription, DNA-templated
GO:0006464Pcellular protein modification process
GO:0006479Pprotein methylation
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0008150Pbiological_process
GO:0008168Fmethyltransferase activity
GO:0008170FN-methyltransferase activity
GO:0008213Pprotein alkylation
GO:0008276Fprotein methyltransferase activity
GO:0008757FS-adenosylmethionine-dependent methyltransferase activity
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009987Pcellular process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0016043Pcellular component organization
GO:0016278Flysine N-methyltransferase activity
GO:0016279Fprotein-lysine N-methyltransferase activity
GO:0016458Pgene silencing
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0016569Pcovalent chromatin modification
GO:0016571Phistone methylation
GO:0016740Ftransferase activity
GO:0016741Ftransferase activity, transferring one-carbon groups
GO:0018022Ppeptidyl-lysine methylation
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0018193Ppeptidyl-amino acid modification
GO:0018205Ppeptidyl-lysine modification
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0031056Pregulation of histone modification
GO:0031060Pregulation of histone methylation
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031399Pregulation of protein modification process
GO:0032259Pmethylation
GO:0032268Pregulation of cellular protein metabolic process
GO:0033043Pregulation of organelle organization
GO:0033044Pregulation of chromosome organization
GO:0034968Phistone lysine methylation
GO:0036211Pprotein modification process
GO:0040029Pregulation of gene expression, epigenetic
GO:0042054Fhistone methyltransferase activity
GO:0043170Pmacromolecule metabolic process
GO:0043412Pmacromolecule modification
GO:0043414Pmacromolecule methylation
GO:0043565Fsequence-specific DNA binding
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0045814Pnegative regulation of gene expression, epigenetic
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051128Pregulation of cellular component organization
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051570Pregulation of histone H3-K9 methylation
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1900109Pregulation of histone H3-K9 dimethylation
GO:1901363Fheterocyclic compound binding
GO:1901564Porganonitrogen compound metabolic process
GO:1902275Pregulation of chromatin organization
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140096
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11419SUV39H, CLR4; [histone H3]-lysine9 N-trimethyltransferase SUV39HEC:2.1.1.355 Lysine degradationko00310
K11420EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMTEC:2.1.1.355 Lysine degradationko00310
Longevity regulating pathwayko04211

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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