Gene information

Detail information of g95685

Location

Gene	Chr	Start	End	Strand
g95685	Scaffold_37607:HRSCAF_405875	217621	218567	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	AER70302.1	1.5e-04	WRKY transcription factor
trEMBL	G8GB83	1.1e-04	WRKY transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G64000.1	50.00	3e-07	51.6	ATWRKY56;WRKY56	WRKY DNA-binding protein 56

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g95685	AT1G64000.1	44	22	0	70	113	110	153	50.00	3e-07	51.6
g95685	AT3G56400.1	179	91	5	1	138	9	186	25.70	3e-07	51.6
g95685	AT2G46130.1	42	20	0	73	114	29	70	52.38	4e-07	51.2

Ortholog group

Species	Genes
Allium cepa	g184938.t1; g331023.t1; g362141.t1; g418189.t1; g43166.t1; g491418.t1; g95685.t1; g95693.t1
Allium fistulosum	AfisC3G00440; AfisC6G01528; AfisC6G01544; AfisC6G04627; AfisC6G04632; AfisC7G00040; AfisC7G00041; AfisC7G00044; AfisC7G00055; AfisC7G00056; AfisC7G05734; AfisC7G05735; AfisC7G05736; AfisC7G05740; AfisC7G05744
Allium sativum	Asa0G04085.1; Asa2G00527.1; Asa2G00528.1; Asa2G00529.1; Asa3G00561.1
Arabidopsis thaliana
Oryza sativa	LOC_Os05g40070.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	75	131	53.0	3e-14

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network