result

Gene information

Detail information of g96527

Location

Gene	Chr	Start	End	Strand
g96527	CHR3	223577397	223579391	+

Sequences

CDS

>g96527.t1
ATGTCACTCATGTCCTTAAAATTCATCATCTTCATCCTCCTCCTACCATACACACCTTCCAAAGCCGATAACTTCACTTTCAACGGATTCACGGGAGCAAATCTAACCCTCCAAGGCGTTGCGACAATCACATCCAACGGCCTCCTCGCTCTAACAAACAAAACATCCAACAGATTCGGTCACGCCTTTTACCCAGCTCCATTAAAATTCAAATCCCCAACCAATAAAACTCTTTCTTTCTCCACCACCTTCGCCTTCGCCATCCTTCCAGAAGTTTCCTCGCTCGGCGGCAATGGCATAGTTTTCTCCATCTCACCAACAACTGACTTCTCCACCGCCACTGCAAGCCAGTATTTTGGTTTGTTCAATGAAACCAGCAACGGCAATTCAAATAATCACATATTTGCAGTCGAGCTGGACACCGTTCTAAATCCCGAGTTCCAGGACATCAACGACAATCACGTCGGCATCGACTTCAATGGCTTGCATTCCATCAACTCCACCAGCCCTGGCTACTACGACGACGATGATTTTGGTACATTCAAAAACTTGACTCTCGTAAGCGGTGATGCCATGCAACTTTGGATCGACTACGATGCACAATACACAAAACTTGATGTCACCGTGTCTCCGTTGCGCACGAATAAACCGAAAAATCCACTTCTATCGATTGTTTACGATCTGTCCACCATTATGGAGGATTTCATGTACGTCGGGTTCTCATCCGCCAACGGAGGATTTCACACTTCTCACTATGTCCTCGGATGGAGTTTTATCATGAATGGAACGAATGCGCCGTTACTCGACTACGCGTTGCTCCCTTCCGTCCCCGTTATTAAAATAAAAGGCGGGTCAAAGGCTTTGGCAATATGGTTCCCAATCGCGTCATTGACTTTCATATCAATAGTTGTTATATCCATAATATGCGTGAGGAGGAGGAAGAAGTATGCGGAGTTGCTAGAAGACTGGGAGCAGGAATACGGAACACATCGCTTTTCATACAAAGACCTGTTCCGAGCAACCAAAGGATTCAAGGAAAAAGAGCTACTCGGATCCGGAGGATCCGGCAGAGTCTACAAAGGCGTACTTCCCAGCTCGAAATTAGAAGTTGCAGTAAAGAAAGTGTCGCATGAATCAAGGCAAGGCATGAAGCAATTCGTAGCAGAAGTGGTCAGTCTAGGCCAACTTCGCCATAGAAACCTGGTTCAGCTACTTGGCTATTGCCGCCGCAGAGGCGAACTTTTACTGGTGTACGATTTCATGCCGAATGGCAGTTTGGATAAGTTTCTTTACGATAGGTCGAGGCCTACGTTGAATTGGAGACTGAGGTTTAAAATCATAAGAGGTGTGGCTTCGAGTCTTCTGTACTTGCACGAAGATTGGGAGCAGGTTGTGGTGCACAGAGATATTAAAGCTAGCAATGTGTTGCTTGACAGCGAGTTTAATGGAAGGTTGGGAGATTTCGGGCTTGCAAGGCTGTACGATCATGGGACAGATCCGCAGACGACGCATGTGGTCGGTACTATGGGCTATCTTGCACCTGAACTTGTAAGGATTGGGAAGGCGACTACTGCGACTGATGTGTATGCTTTTGGAGCTTTTTTGTTGGAAGTTGCTTGCGGGAGAAGGCCGGTTGATCTCAGTGTGGGTGTAGAAGAACATATGCTGGTGAGCCGGGTACTCAAGTGTTGGCAACGAGGGGCAATTTTGGAAGCAAAGGACTCCAGATTGGGGGACGATTATGATGCGTTCCAGCTGAGTTTGGTTTTGAAGTTGGGGTTGCTGTGCTCCAACCCGGTGCCAGCGGCCAGACCCAGTATGAGGCAAGTGGTTCAGTACATTGAAGGAGATTTGACGCTCCCTGAATTGCCCCTCAATTTTTCCAGCTTCAGTGTGATTTCGCCTTTAACCAACGAAGGGTTAAGTAGTTCCTCAGTTAAAAATTCTTCTTTTTCTTCCGTGTCGAGTCTTTCTAGCCTATCTGGGGGTAGGTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256335.1	5.0e-257	L-type lectin-domain containing receptor kinase IV.1-like isoform X1
Swissprot	Q7XUN6.2	1.2e-207	Protein SALT INTOLERANCE 2
trEMBL	A0A8K0N3Z6	7.0e-245	L-type lectin-domain containing receptor kinase IV.1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	57.10	0.0	740	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g96527	AT3G53810.1	655	264	10	24	664	26	677	57.10	740
g96527	AT2G37710.1	658	265	11	20	664	22	675	57.14	723
g96527	AT4G02410.1	658	281	9	20	664	24	674	54.26	708

Ortholog group

Species	Genes
Allium cepa	g95196.t1; g96527.t1
Allium fistulosum	AfisC3G07175; AfisC5G04310
Allium sativum	Asa0G01862.1; Asa2G05965.1; Asa6G04582.1
Arabidopsis thaliana	AT2G37710.1; AT3G53810.1; AT3G55550.1; AT4G02420.1
Oryza sativa	LOC_Os02g19530.1; LOC_Os02g42780.1; LOC_Os07g03780.1; LOC_Os07g03790.1; LOC_Os07g03810.1; LOC_Os07g03820.1; LOC_Os07g03830.1; LOC_Os07g03860.1; LOC_Os07g03870.1; LOC_Os07g03880.1; LOC_Os07g03950.1; LOC_Os07g03970.1; LOC_Os07g04000.1; LOC_Os07g04010.1; LOC_Os07g18230.1; LOC_Os07g18240.1; LOC_Os07g38800.1; LOC_Os07g38810.1; LOC_Os07g38820.1; LOC_Os09g09500.1; LOC_Os10g30530.1; LOC_Os10g30540.1; LOC_Os12g38610.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	23	265	266.7	1.8e-79
PF00069.22	Pkinase	Domain	344	612	155.3	1.7e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0001101	P	response to acid chemical
GO:0002229	P	defense response to oomycetes
GO:0002239	P	response to oomycetes
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0042742	P	defense response to bacterium
GO:0005623	C	cell
GO:0006950	P	response to stress
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0042493	P	response to drug
GO:0009555	P	pollen development
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009751	P	response to salicylic acid
GO:0010033	P	response to organic substance
GO:0014070	P	response to organic cyclic compound
GO:0046677	P	response to antibiotic
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042221	P	response to chemical
GO:0043207	P	response to external biotic stimulus
GO:0044464	C	cell part
GO:0048229	P	gametophyte development
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0071944	C	cell periphery
GO:0098542	P	defense response to other organism
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network