Detail information of AfisC1G00080


Location
GeneChrStartEndStrand
AfisC1G00080chr11023781810269634-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261250.12.8e-258tRNA-dihydrouridine(47) synthase
SwissprotQ7XT07.24.0e-225Zinc finger CCCH domain-containing protein 26
trEMBLA0A8B7BMV41.1e-243tRNA-dihydrouridine(47) synthase [NAD(P)(+)]

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G38890.157.450.0 789FMN-linked oxidoreductases superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag83425.t1
Allium fistulosumAfisC1G00080
Allium sativumAsa7G00741.1
Arabidopsis thalianaAT4G38890.1
Oryza sativaLOC_Os04g02730.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01207.14DusFamily354622185.11.5e-54

Gene Ontology
AccessionOntologyName
GO:0005829Ccytosol
GO:0006400PtRNA modification
GO:0009536Cplastid
GO:0017150FtRNA dihydrouridine synthase activity
GO:0043167Fion binding
GO:0044822Fpoly(A) RNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K05544DUS3; tRNA-dihydrouridine synthase 3EC:1.3.1.89 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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