result

Gene information

Detail information of AfisC1G00191

Location

Gene	Chr	Start	End	Strand
AfisC1G00191	chr1	27317818	27320500	+

Sequences

CDS

>AfisC1G00191
ATGAGAACGTTTATGAAAGGGGAAATTGCATTCATAATATTGCTTCAATTATTTGCAGCAAGCACAGTCATAGTGGATGCAAACAACTGCACGCGAAAATGTGGCAATATGACCATCTCTTATCCATTTGGAATTGAAAAAGGATGTTTCCTTGATGGTTTCAATATTACTTGCAATAAAACTACTGGTCAAGCTTACATATGGAATGTCGAAATCATTGGTATATCACTTACTCAAGCAGAAATGCGCGTCTACAACAGTATAAGTTTTGCCTGCTACTATAAAAATGGAGATTTTAATGGTGACAATTCCTACAGTCCTTACCTAAATACGGCAAATTCCCCATATAGATTCTCAAGCACTCGCAACAAATTTACAGCTATAGGTTGTCGAACACTTGCATATATATATGATCCATATTCTTTTGATAGCCCTTATGTTGGAGGATGCTTATCAAGTTGTAAAGGCAAAAATTATGTCACGGAAAATGCAACATGCTCAGGCATAGGATGTTGTCAAACAGTGATACCGAAAGGGCTGGCATATTATAATGTCACATTTGACAGTGCGTATAATCACTCGTATGTTTGGAGCTTCAGTCCTTGCAGTTATGCATTTCTTGTTGAAGATGACTGGTACAAGTTTAATTCATCTGATGTTTATAAATTTGAGATTTATTATAGAAACAACGCAAAAGTTCCTATGGTTCTAGATTGGGCCATAAGAACTGAAACTTGCATGGAGGCAAAATTAAATAAAATGGGAACGTATTCATGTGTTAGTAGCAATAGCGATTGTAAAGAGTCTAAAAATGGACTGGGTTATACATGCTATTGCCAAAAAGGTTATGAGGGCAACCCATATATTGATCAAGGTTGCAAAGATGTTGATGAGTGCAAAAACAATACGTTGTCCAGTCTATGCTATGGCAACTGCAGTAATATACCAGGCGGCTATCTGTGTTCATGCCCACAAGGAACATCTGGAAATGCAACTATAGAAGGAAACTGTAGACCAACTTCAGGGCATACAAAATTCATTGTACTTATAGGTAAATTTACTTCTGGTCTCTCTACTTTTCTTGTTAGTGCTATCTTGTATTTGATACATAGAAAAGCAAAGCTGGTCAAAGCAAAAGAGAAATGCTTTAGACAAAATGGAGGACTGTTGCTGCAAGCACAAATCAATGCACATCAATCTGTTCGATTTAGAATATTTTCAATAAAAGAAATCACAGCCGCTACAAACAACTTCGATGAAACATTAATCAAAGGACGCGGTGGCCAGGGCATTGTTTACGAAGGGACTATTGACGACAAACTTGTCGCTATCAAAAAGTCTATCATGATCGACGAAAGAAGGATAAAGGAATTCGTGAAAGAAATGTACATATTATCTCTCATTAACCATAAAAATGTAATCCAAATTTTGGGTTGTTGTTTGGAAGTTGAAGTTCCTATCTTAGTCTATGAGTTCATCCCTCGAGGGACATTATACCAACGTATTCAGCAGAAGAATCAAAGGATGTCATTAGGATTTCGAATTAAAATTGCTGTCGAATCTGCATCGGCACTCACTTATTTGCATTACGATTCTTCTCCTCCAATCATCCATGGAGATATTAAATCTTCAAACATACTTCTCGATGAAAATAATGTAGCAAAAATATCTGACTTTGGAGCTTCAGTGCTACCACTTAAAGATATAAATGAAACAGGTGTGCCAGGTACATATGGCTACTTGGATCCAGAGAGCATAATAACTGGTCAACTGACTAATAAAAGTGATGTTTACAGTTTTGCAGTGGTTATTTTAGAGTTGTTAACTAGAATGAAGGCGGTGTATTTAGATGAGTTGGGAGAAAAAAGAAACCTTGCCGAAACATTCAAAAAAGAAGGCCTTGATGGAATTTTAGATGATGAAATTAGGTACGTAATAACAAAAGAACAGATCGTAGAGTTTTCACAGCTTTTGACTGTTTGTCTGAAGACTCATGGAAGCGAAAGACCCACAATGAAAAGGGTAGTGGCTTGGCTTGGAAGAATGCAAGAATTTTACCCGAATTTTTTGGATGACAGCAACTATGAAAATTTCGGGTTACTGTATGCAGAATCCAGTAATCATAACACATACACAGCTCAGTATTACAGTTCAGGGCATCGAACAGTGTTTGAACTGGATTATTTGCTCACAAGATAG

Protein

Gene

>AfisC1G00191
ATGAGAACGTTTATGAAAGGGGAAATTGCATTCATAATATTGCTTCAATTATTTGCAGCAAGCACAGTCATAGTGGATGCAAACAACTGCACGCGAAAATGTGGCAATATGACCATCTCTTATCCATTTGGAATTGAAAAAGGATGTTTCCTTGATGGTTTCAATATTACTTGCAATAAAACTACTGGTCAAGCTTACATATGGAATGTCGAAATCATTGGTATATCACTTACTCAAGCAGAAATGCGCGTCTACAACAGTATAAGTTTTGCCTGCTACTATAAAAATGGAGATTTTAATGGTGACAATTCCTACAGTCCTTACCTAAATACGGCAAATTCCCCATATAGATTCTCAAGCACTCGCAACAAATTTACAGCTATAGGTTGTCGAACACTTGCATATATATATGATCCATATTCTTTTGATAGCCCTTATGTTGGAGGATGCTTATCAAGTTGTAAAGGCAAAAATTATGTCACGGAAAATGCAACATGCTCAGGCATAGGATGTTGTCAAACAGTGATACCGAAAGGGCTGGCATATTATAATGTCACATTTGACAGTGCGTATAATCACTCGTATGTTTGGAGCTTCAGTCCTTGCAGTTATGCATTTCTTGTTGAAGATGACTGGTACAAGTTTAATTCATCTGATGTTTATAAATTTGAGATTTATTATAGAAACAACGCAAAAGTTCCTATGGTTCTAGATTGGGCCATAAGAACTGAAACTTGCATGGAGGCAAAATTAAATAAAATGGGAACGTATTCATGTGTTAGTAGCAATAGCGATTGTAAAGAGTCTAAAAATGGACTGGGTTATACATGCTATTGCCAAAAAGGTTATGAGGGCAACCCATATATTGATCAAGGTTGCAAAGGTATCCTTCTAATTTAATCTCTAACTTTAATTAACGATGTGATCAATTCCTAAAATATATTTAGCCATGTGAAATATTTATGTTTACACGATTATGGATAGATGTTGATGAGTGCAAAAACAATACGTTGTCCAGTCTATGCTATGGCAACTGCAGTAATATACCAGGCGGCTATCTGTGTTCATGCCCACAAGGAACATCTGGAAATGCAACTATAGAAGGAAACTGTAGACCAACTTCAGGGCATACAAAATTCATTGTACTTATAGGTAAATTTACTTGTTTTTTTTTTTTTATGGAACTATACTCGGGAAATCCGGTGGACCGGTAAACTCTTGTGGAAGAATTAAGTTGTGTCTGTCATTTTCATCTCATGACATCTATAACCTCCGGTTACTATTTTACTCGTAGTGTACTACAGGTAATATACATTATTTATCTAAGCCTTGTGATTTCTGACGTTATGCACATGATTAGTAGAGTGTAATATGTCTTTGCTTTGAAAATATGTGACGCGTGTAAGGTATATGTGATGCGCAACGTATACCTTCAAACCAAACAAAAAATAGCTTTAAAAAGCTTTATATTGCTTCAATGCAGATGTTTCAACAAAAATTATTGTAACTCACCAATGATAATAATATGATGGTGTGCTTATATGCAGCTGGTCTCTCTACTTTTCTTGTTAGTGCTATCTTGTATTTGATACATAGAAAAGCAAAGCTGGTCAAAGCAAAAGAGAAATGCTTTAGACAAAATGGAGGACTGTTGCTGCAAGCACAAATCAATGCACATCAATCTGTTCGATTTAGAATATTTTCAATAAAAGAAATCACAGCCGCTACAAACAACTTCGATGAAACATTAATCAAAGGACGCGGTGGCCAGGGCATTGTTTACGAAGGGACTATTGACGACAAACTTGTCGCTATCAAAAAGTCTATCATGATCGACGAAAGAAGGATAAAGGAATTCGTGAAAGAAATGTACATATTATCTCTCATTAACCATAAAAATGTAATCCAAATTTTGGGTTGTTGTTTGGAAGTTGAAGTTCCTATCTTAGTCTATGAGTTCATCCCTCGAGGGACATTATACCAACGTATTCAGCAGAAGAATCAAAGGATGTCATTAGGATTTCGAATTAAAATTGCTGTCGAATCTGCATCGGCACTCACTTATTTGCATTACGATTCTTCTCCTCCAATCATCCATGGAGATATTAAATCTTCAAACATACTTCTCGATGAAAATAATGTAGCAAAAATATCTGACTTTGGAGCTTCAGTGCTACCACTTAAAGATATAAATGAAACAGGTGTGCCAGGTACATATGGCTACTTGGATCCAGAGAGCATAATAACTGGTCAACTGACTAATAAAAGTGATGTTTACAGTTTTGCAGTGGTTATTTTAGAGTTGTTAACTAGAATGAAGGCGGTGTATTTAGATGAGTTGGGAGAAAAAAGAAACCTTGCCGAAACATTCAAAAAAGAAGGCCTTGATGGAATTTTAGATGATGAAATTAGGTACGTAATAACAAAAGAACAGATCGTAGAGTTTTCACAGCTTTTGACTGTTTGTCTGAAGACTCATGGAAGCGAAAGACCCACAATGAAAAGGGTAGTGGCTTGGCTTGGAAGAATGCAAGAATTTTACCCGAATTTTTTGGATGACAGCAACTATGAAAATTTCGGGTTACTGTATGCAGAATCCAGTAATCATAACACATACACAGCTCAGTATTACAGTTCAGGGCATCGAACAGTGTTTGAACTGGATTATTTGCTCACAAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	THU58099.1	1.4e-167	hypothetical protein C4D60_Mb03t10610
Swissprot	Q9LMP1.1	4.9e-109	Wall-associated receptor kinase 2
trEMBL	A0A4S8JA27	1.0e-167	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	37.31	3e-117	419	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00191	AT1G21240.1	713	389	23	5	683	1	689	37.31	3e-117	419
AfisC1G00191	AT1G21270.1	697	399	20	5	679	1	674	36.30	1e-116	417
AfisC1G00191	AT1G21230.1	698	405	19	5	679	1	678	35.82	9e-112	401

Ortholog group

Species	Genes
Allium cepa	g492445.t1
Allium fistulosum	AfisC1G00191
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	28	132	94.9	4.4e-27
PF07714.14	Pkinase_Tyr	Domain	425	677	132.4	1.5e-38

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0006468	P	protein phosphorylation
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071944	C	cell periphery

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network