result

Gene information

Detail information of AfisC1G00235

Location

Gene	Chr	Start	End	Strand
AfisC1G00235	chr1	31906853	31911762	-

Sequences

CDS

>AfisC1G00235
ATGGGATGCTTCGATATCTTAATACAGAAGATAAAGCGCAAAAAGAAGATAAAATCAGAACCGGTTTCATCGATAAATTCATACTATACGACCAGCAGGTCAGTAAACTCTTCAGCCTCTCAGAAAAATACAATATATAGCAAGTCTTCAGACTCGGTATCGTCGCCTAGAACCATACCTTCTTTGTACGAGGAGAGGGGACATTATAATCTTACAGTGTTCAAGTACAAAGAGCTGAAAATTGCTACGAATAATTTCAGTAGATTGAATATAGTTGGAGAAGGAGGATTTGGATGTGTGTACAAAGGGTTGGTGAAGCCTCGAGATGGGAAGGGTGATGGTATTGTTGTAGCGGTAAAGAAGCTTAATAAGAATGGGTTGCAGGGACATAAACAATGGCTAACAGAAGTTCAGTTTCTTGGAGTTGTCGAGCATCCAAATCTTGTAAAACTAATCGGGTATTGCGCTGTTGATGGTGAAAGAGGAACACAAAGACTTCTAGTATATGAGTTCATGCCTAATGGAAGTCTAGAAGACCATTTATTCAATAGTTCATACAAATGTCTGTCATGGAGCATGAGATTACAGATTTTGTTGGGTGTGGCACAGGGGTTAACATATTTGCACGAGGGCCTTGAAGTCCAGATAATTTTTCGGGATTTCAAAGCATCAAATATTCTACTCGATAAGGAGTTCAATCCCAAACTCTCAGATTTTGGATTAGCAAGGGAAGGACCTTCAGAAGGGAACAGTCATGTATCAACAGCGGTAATGGGGACCTACGGTTATGCTGCCCCAGATTACATTGAAAGTGGACATTTAACAGAAAAAAGTGACGTGTGGAGTTTTGGAGTAGTTCTGTTTGAAATTCTTACAGGCAGAAAATCAATGGAAAGGAGCCGCCCGAAAAATGAACAGAAGCTTCTAGACTGGGTGAAACACTATCCAGTTGATAGCAAAAGGTTTAATCACATCATTGACCCTAGACTCGAAAACCAATATCCTTTAATATCTGCAAAAGAAATAGCAAGACTAGCAAACAAATGTCTATCCAAGAATGCAAGAGAGCGACCAAAAATGTATGAAGTGGTAGAGTCCATAAAACAAGCAATGGTGCATAAAGAAATGGATGGTCATATGGAGATTGGAAATGATGATGTGGATTTAGATAAAGAGGACAGAGTTGAGGAAGAAAGGAGTGATAAATCAGTGCAGAGAAGAATGCTTCATCTAGATAAATTGAAGGAAAGTGCAAATGTGATTGGAAAACGGAGGCTGTTTATGTTGTCAAAAAACCCCGATTCATAA

Protein

Gene

>AfisC1G00235
ATTTTCCTACCTTGGCCTTCAAACAACCACAAAACAATCGATTTCCCTCAACTGCTTTCACCATCATTGATATTTTCATCTAATTTTTTCCATAATCCAAACATTTTTATTTTTTTGCCTAGGAATGGGATGCTTCGATATCTTAATACAGAAGATAAAGCGCAAAAAGAAGATAAAATCAGAACCGGTTTCATCGATAAATTCATACTATACGACCAGCAGGTCAGTAAACTCTTCAGCCTCTCAGAAAAATACAATATATAGCAAGTCTTCAGACTCGGTATCGTCGCCTAGAACCATACCTTCTTTGTACGAGGAGAGGGGACATTATAATCTTACAGTGTTCAAGTACAAAGAGCTGAAAATTGCTACGAATAATTTCAGTAGATTGAATATAGTTGGAGAAGGAGGATTTGGATGTGTGTACAAAGGGTTGGTGAAGCCTCGAGATGGGAAGGGTGATGGTATTGTTGTAGCGGTAAAGAAGCTTAATAAGAATGGGTTGCAGGTGCGTCAGTATTTGTTTAATTCAATCAAAAATTACAAAGTTGTGTTTTTGATTCCGTTGAAGAATAACATTTTTGTCATCATTCAGCTTGTAGTATTTGCATTGAAAAATGCAAATTTTCGTAGAAAATAAATATAGAAGTGTTTGAAACTTGTTTTTGGAATGGGCGAAAGTGGAATAAGTTTAAAAATGAAGGTATCTTCCTGATTTCCGCTTATCAATTATGTGTTTGACCATACTGTGAGCATGTTGAACAGACGTTTGAGTTCAAGCTTAGATGTGGTCAATTATGTGTTGATAGTACTGGGAGCTTGTTCAACATGCTCCTGAGCTAGGTCACTTAACAAGCGTCCCATTCAGTTTTTATTGTGAAAATCTCCTGATAATAAATTATAACATTTCAAGTTATAAAACGTTGGAGATTCTCTTGGGGTGTTAATATATCATGGTGAATATTTATATGTTTCTAGTTACTCTACCAGCCTGTATGACATATAGAGATTCTCTTGGAGTACTAATACATCTCATGGTGAATATGTATATGTTTCTGGTTACTCTACTAGCCTATATGACATATAGAAGATGATTAAAAATCAACATACCTTTTGGAGAAATCAATAGTCAAGATGGTTAACCTGCAAATCGTGAATCGTTCATGTTGAAGCCTGCGGAAAATTATAAAGAATGATGTGACAATGAATTTATATTAGAGGTTTTAATTTAAGATTTGGGGATTTTTATGACTATATAATAAAAAATCTAGATGTAGTGCGTGGATAGGATGCTTCTGATCACTTGCTAGCTGAATATATCCATAAACATACACATATGTAAATTGAAGATCATCCATAAGAAGTTCATACCTCAATACATGGGTGATAGTAGTAATGTTGTTGATGCAATTTTTAGTTCTGATTGTTATTGTTTCTTATCGAAAATATGGGTCATTTTCAACAAGGAAAGGTGTTGCTAATAGCACCTGCACACTTTCCATAAACCCACCTCTTCAAAACCGACTTTACTCTTCTTTCATCCCTTTACACCCACAATTGAAAAGGTATAAAAAAAAATTGAACTCACGGTGCATTAGCTTCAGCCTCCTCTCCACTGATCAATTCACACAGTATTCTTCAATCTGAACCAAAATTTAATCTCAATTTATACTCTCTAGATTTTGAGAAGTAGCTAAACTGTGCTTCATTGTGATTCAAAATCAAAACATTGATTCACAAACATACTTAAATCAATATTGCAAATCGTTCATTAGATTGACTGTTGCAAATTTTAGCATATTGATACAAGACAATGACAGATAGAAGCAAAAACAAAGATATATTGCAATCAGAAAGGAGATGGAAGGGAAAATATTTATCACAAAACCGAGTAAATGTGGGTTTATTAAGTATTTAAGTTTATATTCTGTTATGTGGGTTTAGGAAGAATCTAACTGAGTGTAGATAGCAGCCCCCTAATTGAGTAAAGCTAAATACAATAAGGACAAATTTTAGATATTAGACTTTCAAAAATACATATTGCAAAAATAGACTCTATTGAAAACTTATTACAAAATTAAATTTGATTTCACCAGGCCAAAATCTGCACATGCTCACTTTTAAAGTGCACATGTACAAGTTTAAATATTGTACATGCTCGCTTTTAAAGTGCGCATGCACATATATTTTATAAAAACAATTGTACATGCGCACTTTTAAAGTGCGCATGTACAAAAGGCTAGCCTGGTGAGAACCAAACATATTTTTGTAACAAGTTTTCAATGAAGCGTATTTTCGCAATAAGTTTTTTTAACGAGTCAGTATCCAAAATTTTGTCCTAATAAAAATTACCAGCACTAACACATGTATTGGTTTTTCAATCTGTAACAATGCTGAAAAATAAGTTTCATTTCGAGGAAACCCTTTTGGTTAAACTAAACCATAAAATTGCTTTCTTTCTTTTTCTCCTTATGCGACCAATGTAAAATTTAAATGATTAAATGACTAGAGGCAATGTGAACCCTAAAATTAGCTTAAACATTTATGACATAGCCAGTGAAAAGTCACTCAGACTTAAAAATCATCCTTACTATCAGATAACTGTGCATTACTTTGAACATCAAAGAGCATCTGAATATAGAAGTCTAATCAGGACAACTTAAACTCTAACATGCATATTAGTTATCCGTCAAGTCCTTGCAAGAAGTTCAGAACTAAAACCAACTTTGCATTTATTGTTCTTCAATGCTAACTTGTTTCAGTTAACTAGGGACATAAACAATGGCTAACAGAAGTTCAGTTTCTTGGAGTTGTCGAGCATCCAAATCTTGTAAAACTAATCGGGTATTGCGCTGTTGATGGTGAAAGAGGAACACAAAGACTTCTAGTATATGAGTTCATGCCTAATGGAAGTCTAGAAGACCATTTATTCAATAGTTCATACAAATGTCTGTCATGGAGCATGAGATTACAGATTTTGTTGGGTGTGGCACAGGGGTTAACATATTTGCACGAGGGCCTTGAAGTCCAGGTATCTTCTTGACATTATTTATATATAGTTTTTAAAGATCGATATTCTACTAAAACACACACATGCATACACGCACATATGCATGTATGGTACCTGTTAAATAAGGTCAAAAATACTCAAAAGCCATTAACTGAGTATACTTTTACTTCTGATAAAAAATTCAGATAATTTTTCGGGATTTCAAAGCATCAAATATTCTACTCGATAAGGAGTTCAATCCCAAACTCTCAGATTTTGGATTAGCAAGGGAAGGACCTTCAGAAGGGAACAGTCATGTATCAACAGCGGTATGCACTAGCCTAATGTATTGCATTATTATAATACCATCCAAAAACATAAAATAGCATCTTGCCTAATAAATATGTTGACAAACAATTGTTTAGCTGTCTTGTATTGCTTTGTTTCATTGTTGACCATGTCAAAATTATCAACCTAACATTCATATGCATCTCTGGCTGTGGGCCTGCAGGGCAATTATGAGTATTTATGAACGCGTTCCCATTGGTACTATGTAACTTGTTCATATTTGAAAACAAAAAAAAGGGACGAAAAACGTATTTTTCTCCTATAACAATGAATTTACATTAATAAAAAAGAAACTGATTATGAGAGGAGCTCTAGTCTAGGAGAAAACTCACTGCTTACCTATTCATCAATTTTTTATGAGGTTTACTCAGTTATGCCACTATTCAAAACACACATTTATTCTATTAAAACGATTTCCTAAAGTAGGTCACTTTCTGCTTACATGACAGTATGTGACATTCTTACATGGCAATAAATAAAAGTTTGTACAAAGAAAGTTTCAAATGGCATGAGTGCAACTTTAGTTTTAATGTTTTGGAGTTATTTGAAATAATCCCAGTACAAAATGATATTTTTCTCCACACAAACAGAAAGCGATATATTTATGTATATAGTTTTTTTAATTGGTTCGAATGTATTCGTTTCTGAAAGTGACCTAATCGAGTAAAAATTACCTTTTAATTAGTTTCTAATATTGCACATGCATACATGTGGAATACAATTTCTATTAGGCTATTCCAAAGAAAAATTACGTGTGTTAATTGTTGGCAACAGGTAATGGGGACCTACGGTTATGCTGCCCCAGATTACATTGAAAGTGGACATTTAACAGAAAAAAGTGACGTGTGGAGTTTTGGAGTAGTTCTGTTTGAAATTCTTACAGGCAGAAAATCAATGGAAAGGAGCCGCCCGAAAAATGAACAGAAGCTTCTAGACTGGGTGAAACACTATCCAGTTGATAGCAAAAGGTTTAATCACATCATTGACCCTAGACTCGAAAACCAATATCCTTTAATATCTGCAAAAGAAATAGCAAGACTAGCAAACAAATGTCTATCCAAGAATGCAAGAGAGCGACCAAAAATGTATGAAGTGGTAGAGTCCATAAAACAAGCAATGGTGCATAAAGAAATGGATGGTCATATGGAGATTGGAAATGATGATGTGGATTTAGATAAAGAGGACAGAGTTGAGGAAGAAAGGAGTGATAAATCAGTGCAGAGAAGAATGCTTCATCTAGATAAATTGAAGGAAAGTGCAAATGTGATTGGAAAACGGAGGCTGTTTATGTTGTCAAAAAACCCCGATTCATAATTATTTTGTTCAGTTTTTTTGCGTGTAGACAAGTATTAGGACATGGATGTATGGTGCAAAACCATAAAGTTTGCAGCTAATAAAAGTTAGTGTAAAGTTAAAGATTTGATAATGGTTGCTAAATAGAAGGTATAGTTGAAGATAAATAGCGAGTTACAACTTAAGTATATTGTACATAAAATCTACCAATAAACTTGTACATAAAGTATACAAGAAGTTCCAATTGTATTGTTCTAAACTATAGTAATAAATTAAGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010919811.1	6.8e-162	probable serine/threonine-protein kinase PBL19
Swissprot	Q9LTC0.1	4.9e-109	PBS1-like protein 19
trEMBL	A0A6I9R3E5	4.9e-162	probable serine/threonine-protein kinase PBL19

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47070.1	58.04	3e-114	408		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00235	AT5G47070.1	336	136	3	37	371	38	369	58.04	3e-114	408
AfisC1G00235	AT2G28940.2	373	151	6	1	364	21	384	54.69	2e-108	389
AfisC1G00235	AT3G09830.2	371	177	2	14	382	11	380	51.48	1e-107	387

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	90	366	168.0	2.1e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0080142	P	regulation of salicylic acid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network