Gene information

Detail information of AfisC1G00287

Location

Gene	Chr	Start	End	Strand
AfisC1G00287	chr1	38338727	38339511	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008785419.1	9.0e-47	transcription factor DIVARICATA isoform X1
Swissprot	Q8S9H7.1	1.2e-43	Transcription factor DIVARICATA
trEMBL	A0A8B7BU63	6.5e-47	transcription factor DIVARICATA isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38090.1	51.16	4e-44	174		Duplicated homeodomain-like superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00287	AT2G38090.1	172	63	2	2	152	41	212	51.16	4e-44	174
AfisC1G00287	AT5G58900.1	167	65	1	2	152	46	212	51.50	6e-41	163
AfisC1G00287	AT5G01200.1	162	57	2	13	150	54	215	50.00	3e-40	161

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	82	126	42.9	3.5e-11

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network