Detail information of AfisC1G00332


Location
GeneChrStartEndStrand
AfisC1G00332chr14843995948458065-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020599046.14.3e-86PHD finger protein ALFIN-LIKE 8-like isoform X3
SwissprotB8BJV8.14.2e-78PHD finger protein ALFIN-LIKE 8
trEMBLA0A1U7WYV81.0e-81PHD finger protein ALFIN-LIKE 3-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G42790.159.119e-71 263AL3alfin-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag351755.t1
Allium fistulosumAfisC1G00332
Allium sativumAsa7G01187.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family13137201.72.3e-60
PF00628.26PHDDomain18723538.19.5e-10

Gene Ontology
AccessionOntologyName
GO:0003714Ftranscription corepressor activity
GO:0016020Cmembrane
GO:0005829Ccytosol
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009414Presponse to water deprivation
GO:0044212Ftranscription regulatory region DNA binding
GO:0016036Pcellular response to phosphate starvation
GO:0045727Ppositive regulation of translation
GO:0035064Fmethylated histone binding
GO:0043565Fsequence-specific DNA binding
GO:0048767Proot hair elongation
GO:0055065Pmetal ion homeostasis
GO:0071472Pcellular response to salt stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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