result

Gene information

Detail information of AfisC1G00384

Location

Gene	Chr	Start	End	Strand
AfisC1G00384	chr1	57609343	57617042	+

Sequences

CDS

Protein

Gene

>AfisC1G00384
GACGTTCTTGGATTCTATCAAGAGGCTCAAAATCATGAGGAATTCATATGCCAGTGGCCTTGGTAAGTCAGTTCCTTATTGCTATCAAAATAAAAAAATATATGAATACACATATATGTGCGCACATGTTCATATATAGGGGCACACACATCTTTTTATTTGTTGTTCTAAAATCAGCCCTTCGTCTTTTTGTGCTAAATTGTTCATATATATAGATACATACACATCTTTTTTATTTATTGTTCAAACCAATCCAAAATGATGTTTCTAATCGATGGTTAAAATAAGCATTTTTGATAGTTATTAAGTTATAACTTTGAATAAGTTAAAAGTTCTTTATCGACTTCAAAATATGGCTAATCTCGAAACTTTGCATTATTCAAACAAACATTTGGATCCTAGGGATCATATAATAAGCTGAATATGTCTATTAGAATATGGGTTGTCTAATTTTTGAATCTGAAGTAAATTTTAAAGTATGTGGTTATCATGGAGCTGAATTTTGTGGACAGGCTAATAAACTCTCTTGTTCCTACAAACATGAAACACGACCAAAACTAATCTATCATGCAACATGTAAATCATTTGCTAGAAATTACAGTAGTTATTCCATTATTAAGTTCATTTCTATTATTTTTAGATAAAAGGAGACTGCTATAAAATTATGTAAATCCATAGAAATTTGCAGTCTACTGGTGATTCATATAAGTTGAATTGAAGAGGAAAACAATACATTGCAATAAGGGTATATTGATTTTGTTTGTTCTTCCTCTAGCCCCTCTTGTTTTCTTTGTATCCAGAGGCTAAATTAACTTTTTCATCTTTCACATGATCCACATCTGTGACATAAAAAGCTTTATGTCGCTCCATTTTGATATGCTCAGAGCCTAGATCCATATAATGTAAAAACTCATGAAATGGAAAATAAGATCTGTATGTGTACTTCTTAAGTGTGCCATTTTCTCTATTCAACATGTTTACTTGCAGGTTCGAGATGCTTTTCAACATATGGTGTGGTGTATTTAACTCCATGATTGCCAAGGATGTAAGATTTAATGCAGAAAAAACAGCAACTGGGAAACTATTATTCTACAAAGGTGGGATTCATTGTGTTGGTTTGATCGATCGAACAATATGAAGTCTGGAAGTTTGTAAATATGTTAAGTTAGAATTTATATGCTAGCAGACAACTTACATGCACTATGTTTTCCTGAAGCCATATTTTTTCCGTTACCATATTTATTTTTAATTAGGTATGGAGTTTTACAATGAAATCTGGATGGTGCAAACATGAGATAGCGATACAAACAGAACCAAAAATTGCGAATGTTTAATTTTAAGTGGGGCACAAAACATTGGTTGTATTGTGCTTCAACTAAGAAATAATAATAATATTTTTACCGGCGTATATGATGTTTTTGCATTTTTTAGTGTTTATATAAAGGAGAATGAAGTGGTATCAAAATGAAAATAAGAAGGAAGTGTTTAAATCAGGTAGTCAGGTCTGTAGTATGATAAGGTAGTAACATTGTTTTATTCTTCTGCATCAGCTTTTGGTTCCTCTTGTCAGCACATATAAATATGATGGACCATAAACTAACATCAGCTTAGCGAAGATAGAAGCAAAGATTTTCATGAAGCCGTTAAACAAAAGAACTACAGTTGTGATTAAATCATTAGAATCTTGACTACAGGGAGCAAAGTGCATCTCAACGGTACTTCTAATCAGCAGTACAAGGATGATTTTACAGCCTCCATCACTAAGGTAAACTTCCAAAACATAGACGATTGTTCAAGAAAAATATCCATATTATATGGCATTAATACTTGATTGCATTATTACACGCTGTTACTAGGGTTTGTTTGGTGAAGATTCAAATGAATTAGCAGAAGCACTTTGTGCTGCAATTAGATGCTAATATTTAGTCTTTCTATTCTTTGATTTTTGTTCCACTGTAAAAATGAATTTGGATATTTAAATCGGGAAAAATATGTTCTATACATTTTGATGGCCAACTGAATTTGATATGCAATAAACTTGATCAAATAATATTTTAACGTATGTGTGCTGCAGAGTCACTTGAATGAATATTGTGTTTTTAATTTCTGTATCAACTACAGTAACAAACTGTGTTTCATTTTGCGCAGGTTAGAGGTGTAAAACCATTGTCCCTTCCAGAAATGGCCAACTTGTTCAGCAACCTTCGTGTGGGAATTACTCTAGGGCTGGTAAATATATTAAATGTGTGTTTTTCTTTTATGAATGTTATCAGTTGATTAATGGTTAATAAATATTCTAGGACACAAATCCTAACGATCTTGTGGGAAGCACTACATTTCATTTGGAGACAACTCATTTCACTATAAGTTTTACACAAATTAACTAAGTTTATAATAATAATAATAAATTATAAAAGATTAACCAAGTTAAACAAGTATTTTGAAAATTAACTAAATTTATATAATAATAATCAAAATAAATTAACTAAGATTATAGTAATTCACTTCATCAATTTTGTTTTGTAAAAACTAAATAATTTTATAAAAATTAACTGATTTAATAATAATAATAATACCAATATTAACAAATTATAAAATTAACCAAGTTTCATTAAAAATAACTATGTGTAGAACAACAACAACAACAACAATAATGATAAATTATTAACCAATTTAACAAAGTTTCAAAAAAATTTAACTAAATAATAATAATAATAATAATAATAAATAACTAAGTTTATAAAAATTAACTTCATTAATTAAGTTAATAAGAATTAAAGAAGAATATATAATTAATTAAGTTTATAATAATAATAAATTAACTAAGTTAAGAAAATTAAATAAGTTTATAATGATAACAACAACCATAAATTATATAGTATTCAACATCTTTACATCTAATTCATTTTATAAATTTCTAAATTTTGTAAGACATAACTAAGTTTACAGGCAAATATCGGCGAATTTTATAAAAATAACTAAGTTTTATAAAATAACCAAGTTGATATATACATATATATACAACAACAACTAAGCCATTATTCCCAAACAAGTTGGGGTCGGCCAGAGATGGAACCCAAAACTAAATGACAAAATCAATATAAAAGTCATAATAATAATAATAACAGTAATAAAAAAAGTCAAATAAGTAAATTATTAATAATAATAACTAAGTAAAATAAATATATATAGAAAAAGCCAAAAAAAGGAAAAAAAAGAGAAGAAAAAAATGATAATAATAATCTTTATTAATAGTTGGCTTGGAAGCGCAAACTTTTGGTCCAACCATGAAGTTCCAAAAATGCCCTTATATATATTTCTTTATCAATAGTTGTTTTGATGTCACACTCTTTTGGTTTCAGCGTAAAATACTAAAAATGTCTCTCTGCAAATATTATAAAAACTTAATATGACTTAAAAATAAGATCTGACAATTAAGATTGATTTAGAAATTCAAATATTTCTTACAAATATTTACCAAGTCTTAATATCACTTAGAAATATGATCTAATAAATAAACTACTTTACAAATTCGTTTTTTATTAATAATAATATAAATAAAAATTTAAACTAACCAAAAATTAGATAGTACAACTTAGAAATAAAAATTCAATTAACTATGTATGATTCAACATAGAAATATGGCTAAATATTTGTGTAAATCATTTTTTCTTTTGAACGTATTAAACAAATATGATTTGTAGAAAAACAATTTTGATGCTTTTAACACGCGCGAAGCGCGTGCCATAACGCTCGTGATAATAATAATACTACTAGTGATAATGGTACTAATAGTGATAATGGTCAAAGACCATAATAATAATAATTAACTAAGTTTTTAAAAATTAATTAACTTTATATAATAATAATGTAGATACTTTTGTTCTCATGGTCTACCACTGTCAACTTTTTTACTCTTTGTTCTATTTTATATATGGGCCTGGATGAAGTAGTGTATGGACACATATCCAATTCCCACTCTATACTACAACTTATTTAATTATCCTTCTTATTTAATTATCCTGCATAATAAACAAATTTCTTAACATATATGACATAAGATGATTTTGTTTGATTCGCTTTGAATGTCAGTTGGATAAATGCATTTTCATTCTGTATAGCTACTAAGTAGTTGACCTTTGTGGTAATAAAAATGAATTAGAACTGTATCTTCTATTTTTGGATACAATTATAAAATACCTAAATTCTATTAGTGATTTCTTTTTCCAAAGAAAATGCTGGATTTTCTTTAAGTTTTACTGGTATTCCTTAAAGCATTAATTCAACACGCCTGTGCCAACCCCATTTGTATTCTTGAGAAGGTTCCTTAAATCAGTTGAAAATGATACTAAGGTTTGCAGTTATTATTGACATTTACTACAACTACAATATATACATTATTTGACATTGAAATTAAAGTATTATTACTCACGATATGCAGCTGAAGCATTTCTTGTTGAGTATCAAATACTTAAGTTTCAATCTTCATTGCTGACTGCTGCTATCATATACAGCGCTCAATGTTGTCTCAAATGATTCAAATTTTGGACAAAGACTTGTGAACAAATATACTATATCTACACTGCAGAAATTGCGTCTGTCGTTCCTCACCTTCATGTAAATGGGATAATGCATAGGGACCTAAAACTTAAGAATGTTCTTCTGGATGTTGATGGTCATGTAAAATATAAAATTAATTTTTGCTGAATTTGAGAAATTTTATTTACTTTTTCTGTATTGCGAAAAGCTATTCTATGCTTTAGAGGAATGTTTTACCTTGTGTGCTAAATTACTATGCGAAGGGTGCTGTAATTGTTAACTAATATTCATAATGTTACTACAAATTAGGTGATGCTAACTGATTATGGTCTAGCCAAAGAGTTTGATGAAAACACGAGATCAAACTCAATGTGCAGGACAATCGAGTATATGGCATCAGAAATTATTCTTGGAAAGGGACATGATAAGGCTGCTGATTGGTGGAGCGTTGAAGTCCTATTTGAAATGCTAACTGACAAGGTTAGTTTAGATCGTTGGTCCTTATTTTTCATCATAATTAAACCTCAATTCATGGCTGTATCTGGATGATGTAAATAAGTCAGCAATGTCTACTGGTTCATTGTGTTTACATCAGTCAAGCCATTATGCTCTCCATCTCTTTATTATTAATTATTTTGTGCCTTTGCACTAATTTCAAAGGTTATCCTAAGTCTACATCCCTTTTTGATTCCGTTTTATTACAATTTTCCCTACATTAATAGTATTCCTTTTTTTGGCATTGATGCATTGGTGACAGTAATTGTTGAGAACAAACGATTACCGTCATATTGTTGAGAAGGTTGATGCTATAGCTCCTATTACGCCTATGGCTATACTGAAAACATTTATGGTACTTGATTTTTATGGTGTATTTCTATTTTTTAAGGATTAGCAATTTCATTATTTTTCTCTTTTTTCAACCTATAGACTGCAAATTCAAGAACAAACGATAAATGCAAGTTGATGGATTTATCGGGAAAGGGGAAAGTAGTTGCTTTAGGATGCGTGGAGTCAACCGATCCTAATGCAAGGGTCCATTTCAAATGCACATTTCAATCTTTTCTCTTCATCGAAAGTAAGGTTATAAAGTATCACTGTTATCATGGTTTAGAAAAAACTATCACAATTAGCCTGCCAACATCTTCAGTACTGACAGTACAAACTTCTCACTCAGCCCTATTTTGATATAAACCTTTCACTCCATACAACCTGATATTGTTGGAATGAACTCGGCTTGGTTGATTGCAGCACTTAGCCTCTCCTCGTTACTAATATTTATTTCGCATATTTTGTGCTGCATGATATTTGGACACATTATTTTAAGCTGCATGTACACCAGCACCTGCTCTGTCTCGCTCATAATCATCGCCATGCCAGTCCATACATGTTATTTAATTACTGCCATCGTTTGTCACTCAAGTTGCAAGCTTCGGTTCAGTAGTTTGATAGATCTTCACCATATTCAGTTCATATTTCACATTCAGTTCAAGCTTCATTCACTTCAAACTATTGCTGCTCCAATTGTTATTGCTGTTGAATGATATTTTGTTGCTTCATTTTCAGTTCAGTTTCTTGTGAAAGTCGTTGCTTGCAGTTGCATTAGTCTTTCTTTCGGTCTATTGCATACATCGATGCATACTGTCATTACAACAGTCTAAGCCTTTGTTGCATCATATTCAGCTGAATATGACACAACTGGTCGCCTTTGTTAACTGGTTGCTTCAGTGTCACCTCTGTCTGGCCTAGTCCATTCTCAAACAACTGGACTTGTGTTCTTCAAATAGCCTATGGTTCATCACTTGAGTGGTGATTATTCTTTCTATACATTCCAGGAGATGTCGGTGCATGTTGTGCATGCTTCATTCAGTTCAGTCAGTGCATATTACTTGATGCATGCTTGTGCATGATTGGAGCAAGTTTCATCTAGATTGCCATGATCGTTCTCTCTCCTAATGTAGAGGAAAGAATAATCGACCACCTTCAAGGACAAGTAAATTTGAAAATGAGATATTTTATTTAGTTTTTCAGTGTTCGTATGGGTTTGCATGAATGACTGAGAGGTTAGGCATGAGTATCAACAACTGAAAAATAGAGTTCAGCTTGTTTTGATCATTTCAGATCTATAAATTGGATTAGACATAATTGTTCTTATGACAGAATTTAGTTGCATCAAATTTTAAAATAGGACTCGTGTATATCTATTGTAAGAAACTTTAGACATTGTACCATAAAGTCAAATGTCTCATTATTTTATATGCTACCATTCTTTCGTCAAATGAGACAAAACCACAACCAAAACGTGCGCACAAATTGGTCACATGGTTCAATAAAAGAGCATATACTATTCCTAGATATGAAAGGTTCAGACATCTTAAAATATTCGACTTTCTTGGTCACGCTATAAAACACTATCAAATGCATTTATACCAATCCTAAAATCAATATTTGATTTGACACCAAATGAGCATGACTGGTATGAAGATGTGCATCATCTCTTCAGAGGTGGATTACCATTTCCTAGTATTCCACTTTTGGATTATATCAAACAAGCCATTCCTTTACCAATGATCAAGGAAACAATTAGCACTCAAAATGGGAAAAGCTTCCTCAAGTACCTGATTCCTCAACTTATTCAAGGTATGTGCTAGCATAATTAAGGTCTTGTTATTAGATAAGCTCTAGGTGCATTTATTTTTAATCTAAAGAATGAAGGAATAATTGCATTTTACTATATTAGTTTTAGTTATTATAAAGTACTGGTTTGCTAACAAGAGTAATTGACTGTAGACATGAAAACAATTGAAATATGAGTCTATACATTTAAATTATTGAATAGGTGCAGGTGCGAAGTTGTGTGTGCTTGTGCAAGTTTAGGTGTGTGTGCAGTTTGGTGCATGTGTGTATGTGCACTTGTATTATTAAGAAAAAGCAAACGCGGGCTGTTGTAATGCAACATGCAATTATCTTCATTCATCTAAGAAAAATTTGATGTTTAAAAAAGTTATGTAATCTTCATCCATCTAATAGGTACTACCAATAACCTATAATTTTCATCATAATTTTTATATAATTATTTTCAAATTGTTCTGAATTTTCAGAAAGTACTACCAATGACCGAAGACATGCATGAAGAAAGGCTTTGAGTAGTTCAAGTTCTTAGT

Functional annotation

Database	accession number	e-value	annotation
nr	KAA3453518.1	1.9e-20	serine/threonine-protein kinase AtPK2/AtPK19-like isoform X2
Swissprot	P42818.1	2.4e-20	Ribosomal-protein S6 kinase homolog 1
trEMBL	A0A5B6U8A2	1.4e-20	Serine/threonine-protein kinase AtPK2/AtPK19-like isoform X2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G08720.1	78.33	7e-22	100	ATPK19;ATPK2;ATS6K2;S6K2	serine/threonine protein kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00384	AT3G08730.1	62	13	1	105	165	267	328	77.42	6e-22	100
AfisC1G00384	AT3G08720.2	60	12	1	107	165	275	334	78.33	7e-22	100
AfisC1G00384	AT3G08720.1	60	12	1	107	165	275	334	78.33	7e-22	100

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	107	166	45.7	4.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000082	P	G1/S transition of mitotic cell cycle
GO:0001662	P	behavioral fear response
GO:0001707	P	mesoderm formation
GO:0001764	P	neuron migration
GO:0003009	P	skeletal muscle contraction
GO:0030036	P	actin cytoskeleton organization
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004691	F	cAMP-dependent protein kinase activity
GO:0004692	F	cGMP-dependent protein kinase activity
GO:0004711	F	ribosomal protein S6 kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005246	F	calcium channel regulator activity
GO:0046872	F	metal ion binding
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0005794	C	Golgi apparatus
GO:0009612	P	response to mechanical stimulus
GO:0007281	P	germ cell development
GO:0007568	P	aging
GO:0007584	P	response to nutrient
GO:0007616	P	long-term memory
GO:0008285	P	negative regulation of cell proliferation
GO:0042802	F	identical protein binding
GO:0042493	P	response to drug
GO:0009636	P	response to toxic substance
GO:0009408	P	response to heat
GO:0009409	P	response to cold
GO:0009651	P	response to salt stress
GO:0009749	P	response to glucose
GO:0009986	C	cell surface
GO:0014065	P	phosphatidylinositol 3-kinase signaling
GO:0014732	P	skeletal muscle atrophy
GO:0014878	P	response to electrical stimulus involved in regulation of muscle adaptation
GO:0014911	P	positive regulation of smooth muscle cell migration
GO:0016358	P	dendrite development
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019220	P	regulation of phosphate metabolic process
GO:0019901	F	protein kinase binding
GO:0019934	P	cGMP-mediated signaling
GO:0030165	F	PDZ domain binding
GO:0030553	F	cGMP binding
GO:0030900	P	forebrain development
GO:0031058	P	positive regulation of histone modification
GO:0031594	C	neuromuscular junction
GO:0031929	P	TOR signaling
GO:0031982	C	vesicle
GO:0032496	P	response to lipopolysaccharide
GO:0043087	P	regulation of GTPase activity
GO:0033574	P	response to testosterone
GO:0033762	P	response to glucagon
GO:0034612	P	response to tumor necrosis factor
GO:0042277	F	peptide binding
GO:0042995	C	cell projection
GO:0043201	P	response to leucine
GO:0043269	P	regulation of ion transport
GO:0043491	P	protein kinase B signaling
GO:0043987	P	histone H3-S10 phosphorylation
GO:0043988	P	histone H3-S28 phosphorylation
GO:0043990	P	histone H2A-S1 phosphorylation
GO:0044283	P	small molecule biosynthetic process
GO:0045471	P	response to ethanol
GO:0045931	P	positive regulation of mitotic cell cycle
GO:0045948	P	positive regulation of translational initiation
GO:0046324	P	regulation of glucose import
GO:0046627	P	negative regulation of insulin receptor signaling pathway
GO:0048471	C	perinuclear region of cytoplasm
GO:0048633	P	positive regulation of skeletal muscle tissue growth
GO:0048661	P	positive regulation of smooth muscle cell proliferation
GO:0051050	P	positive regulation of transport
GO:0051092	P	positive regulation of NF-kappaB transcription factor activity
GO:0051721	F	protein phosphatase 2A binding
GO:0055082	P	cellular chemical homeostasis
GO:0060087	P	relaxation of vascular smooth muscle
GO:0071363	P	cellular response to growth factor stimulus
GO:0071549	P	cellular response to dexamethasone stimulus
GO:0090331	P	negative regulation of platelet aggregation
GO:0097223	C	sperm part
GO:0098779	P	mitophagy in response to mitochondrial depolarization
GO:1901617	P	organic hydroxy compound biosynthetic process
GO:1903522	P	regulation of blood circulation
GO:2001237	P	negative regulation of extrinsic apoptotic signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network