result

Gene information

Detail information of AfisC1G00433

Location

Gene	Chr	Start	End	Strand
AfisC1G00433	chr1	67291633	67294603	+

Sequences

CDS

Protein

Gene

>AfisC1G00433
ATGCCAAATTTCGACAAGCTAACGGTACTTTTGGTGGATGATGATATGCTTCAACGGAGAATCTTAAGAGCATTACTCAAAAAATGTGGAGTAAAGCATGTCCAAGAGGCAAAAAATGGTAGGGAAGCTGTGGGTCTTGTTAGCAATGGTTCAGCTTTCAATATCATCTTTATCGATAGAGACATGCCAGAACTAAATGGTGTTGAGGTAACTTTCACAATCTATCATTCTATTAGATATTTAGATAATTTAAACATTATCCATAAATTCATTAGGATACATGTTTCTATAAGGTTATCAAATATTGAAATTCCACATTTATATTTCACTAATCTACCTGGATTGAACTACCTATCATTTGTGTTAGCAAACCCTAATTTTTTATTTAACATGTTTTTGGAAATATGGAGTATAAAGTCATGATAAATATGAGATATTGGAATAGCTGAAGAGTGCTGCTAATAATATGAATAAGGGCAAAAAATACTCTACAACTTTCCCACACTTATGAGAGAAACACTTGTACTTTTCTTTAATAACCAATGGCGGCAGTTTTCCTTTTTTATTTTCTTATATTATATTCAAGGGAATTTAATAATCTTGCCAATTGAAATTAATATACGGTTCTTGACTCAAATATCTCAAAACAATAGCTACATAATTGTAAAAACAAATATAATAAACCTTACGGAAAAATTTAAGGATGTTTCCAACAAATTACATTAGAAACTCGATGAAAAAAGATTAGCAGCTCTACAAGTTGTGCATAATTTAAATAAATTGTCCTTCAAATATACTAAAGCTTTGTCATATTCTATTCTTCGAGAATGTACTTCTTGTAAATGCTCTAGTTTTAATTACAATACTAAAACATGTATATGTGACCTTTTACACAATAAAATGAATAATCATTAAGTGGATCCACCGTATCATTCATCTTTCCAACCGTGAGGGGAAGTGTCCTTGAGATGTGAGAAAATAAGACATTTTTGTTAATTCATAGTATACACCAACTTTTTCATTAAAAATAAAGCGGTAATACATAATGTTTTCATTTCTGTGAAAAATATAGAACAAATACGTTATAGTAACTATCAACGACATTCAGTAAAATGATATAAATGAATGGTAAAAGAACCGGATAAAACTTGTCAAATTTTGAACAAAAATGGGACTAATATTTGTATCAGTATCTCAAAAACTACGTGGTGCATCATGTTTTTGTGTAAAAAAAATTGTGTGCATTTTGAGTAGTTTATTTTCACAAAAGGCTTAAATATAAAAGTATTTAATAGTAGGGTATAAAAAATAAAATATTATGTATACAAGAATAAAGAGTAAACCAATACATATATCCTAGAATTCAATCTTAATTTCATCTATTTATGCCCATTATCGAAAGTACTAGTAAAAAATACCTTGTTAATATGTGTTTTCCTTTTTTCAATACTTAGGTAAACCAGTTTTCAATATGCAATTTTTTTATGACAATAGCATATTTATTTTATAAGGTAGTTAGATTTTAGAATCAAAACAGATATGAAATGTACCACAGTGAAGATTATTACATAATCATTTTGTATGTTTTTTCATATGCATTCTATAATTATAAAGATGTGTTTACACTAATAACAAATTTATGGTAAAATATCTATGAACTAAGTTATGCAGAATATAACCTATATATCATAGCATCATTTATTGTGTGTATAGTTCAAGTTTAAAAGAATAATCTTTACAATAATATTTATTATTGAATGGTTACTTGTTGGTACAATTATTTAGATATTTTCTATTTTATTATAACAAGGCAACCTTAATTTTTGTTTACAAAATTTTATGGAAATTGATATTAGTTATACAAATTCGGTGATAATGATGATTATATTGAAATTTAATATGTGAATATGGTTATGAATTAATTAGAAACAATGATTTCAAAATAATGAAAATGAATAAAGAAAGTGGAGTTCATAAAATTAGAGATGTCGCTGCCAAACAGTGACAACATTCATATATCCATTAATACTTGACCATAAACCCATTACACCGTGCTAGGTTCCATTATTTTTATAGAGCTCTAAATTTTTCTTGAAAATTAGAAATTGAGTGAAATTATGTAGTTAATCGAAATAAGGATTATAATAAACTTCAGCCATGAGAATGAGATTAAGATTTGCACAATTTTACTATGAATCTGAAGTTAATTCAGACTAAGAGCAAAGCTTATACTTAGATAAATCATAACAGGAATATCTTTAATTTTTTACAAGTTAAATTAGAAAATAATAAAGATGAAATTATTAGTGAAAGAAAGAAGAAAAGGTAAGTAATTTTAATCATTGTACATTGCTAAATACATGTTCCAATCAAAATTACTAGTAAGGAAATGCCAAAACAAGCATAATTGTACTGAACATTAATTTGCTCTATAAATTTTATTTGGATATCTTTTCTAAAACACAATGTTGTTTTGGATATTTAATTTTGAATGGTAAGTAAATTATTCTGAATGATATCAAGTAGGTAAGGAAATCTATTTTTGAATGATATCGAGGAAGTAATGAAGACGTTTATAATTTTCCTAACTAGTGATGTAACAAACGATAAGTATTTCCCTCTAATAAAGGATTGGTAGAGGTACAACTTATATTTCTCCTCTAACATAATGGATCTGATTCTTACAATTCAGTAATATGCATCTAGACAATATAGAATTTGGGGAAATTAAAAGTAATCTTGTGGAATTAGGTAAATTTCAGATAGTCATTTCTGATGATAATTTTCTTTGTGTCAGGCTACTAATCAGATTAGGTCTATTGATGCATATGTAAAGATATTTGGGGTGAGCTCGCACATTGACACATCAATTATCAAGGACTTTATGGATGCAGGACTAAATGGCTTCTATACAAAACCAATGACAGCAGACAAACTTATTAAACTATTGGATGGACTAGCAGTTGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	KOM29921.1	4.4e-21	hypothetical protein LR48_Vigan831s003900
Swissprot	Q9M8Y4.1	3.9e-14	Two-component response regulator ARR22
trEMBL	A0A0L9THG5	3.2e-21	Two-component response regulator

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G26594.1	39.20	6e-20	92.4	ARR24;RR24	response regulator 24

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00433	AT5G26594.1	125	73	2	1	123	10	133	39.20	6e-20	92.4
AfisC1G00433	AT3G04280.3	119	66	3	7	123	22	139	42.02	4e-16	79.7
AfisC1G00433	AT3G04280.2	119	66	3	7	123	22	139	42.02	4e-16	79.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	9	120	86.3	1.4e-24

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000156	F	phosphorelay response regulator activity
GO:0042742	P	defense response to bacterium
GO:0004721	F	phosphoprotein phosphatase activity
GO:0005034	F	osmosensor activity
GO:0005783	C	endoplasmic reticulum
GO:0005887	C	integral component of plasma membrane
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006469	P	negative regulation of protein kinase activity
GO:0007234	P	osmosensory signaling via phosphorelay pathway
GO:0008272	P	sulfate transport
GO:0042802	F	identical protein binding
GO:0008969	F	phosphohistidine phosphatase activity
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009885	F	transmembrane histidine kinase cytokinin receptor activity
GO:0009927	F	histidine phosphotransfer kinase activity
GO:0010029	P	regulation of seed germination
GO:0010086	P	embryonic root morphogenesis
GO:0010150	P	leaf senescence
GO:0016036	P	cellular response to phosphate starvation
GO:0018106	P	peptidyl-histidine phosphorylation
GO:0019955	F	cytokine binding
GO:0023014	P	signal transduction by protein phosphorylation
GO:0033500	P	carbohydrate homeostasis
GO:0043424	F	protein histidine kinase binding
GO:0046777	P	protein autophosphorylation
GO:0048509	P	regulation of meristem development
GO:0048831	P	regulation of shoot system development
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0071329	P	cellular response to sucrose stimulus
GO:0097308	P	cellular response to farnesol
GO:1900445	P	positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus
GO:1901564	P	organonitrogen compound metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network