result

Gene information

Detail information of AfisC1G00438

Location

Gene	Chr	Start	End	Strand
AfisC1G00438	chr1	68738995	68745835	+

Sequences

CDS

Protein

Gene

>AfisC1G00438
ATGGGACAAAATTTAGGTTCGTATCTAGAGAGGCAAAGAGCTCAATTACAATGGCAGCAGCATACTCAAGATAGCAACAATTTCTTTATCGATAACCTGTTCTCATTTCACGATGAATGCTTAGATGATGGTTGGCCTATTATTGCCACAAACAATAAAGCTGCTGCAGCTGCTACTTCTACAACAACAGCATCTAACTCAACTTCATCACTTAAATTTGCCCAAGAGAAGTCAAGCTCCAAGAAGAGAAAGGCTGACATGCATCCAGTGGTAATGAAATTCAATTAACAAAACATTGAAATTAATATGAAGTTGGCTAAATGGATCTACATAAACAGGTTACAGGCAATGAAGATGAAGGAAATACAACTGAGGATTCAAGTGAGAGCAGCTCGAAGGATAAAAACAACAACAATGGCAAAAATAAGAAGCCTGATTATGTTCATGTAAGAGCTAGACGAGGACAGGCAACAAACAGTCATAGTTTGGCTGAGAGAGTAAGTAGAGTGAATTCATTAACAATATTTATCGAACAAATATGAATATTTTAGATAACTGGGATCAATAAAGCATTTGAACGATAAAAATGCGGCAGGTGAGGAGGGAGAAGATAAGTGAGAGGATGAAATATTTGCAAGCTCTAGTGCCTGGTTGTGACAGGATCACTGGGAAAGCTGGCATGCTAGATGAAATCATCAACTATGTTCAATCCCTACAAAAGCAAGTTTAGGTATTTACATTACTAGCTACTTACATCCTGATCTTTTATATTTCCCCCGTTGCTAAAAGAAAGCAATGATCAAAACTTCTAAATGAATAATCATACATTCTACTTTGAGGCCGAGTGATACACATCATGTTCTCTCTATATACACTACTATCTCCACAGCATTTTTATTTGGCTTTTTTTTATATAAAAGAGAGTAATAAAAGCATGATTTTAACATTCATTTTTAAAATCATATCAACATGCAGTTTTTGTCGATGAAGCTTGCCACCGTAAAGCCAACGTTGGACCTGAACATGGATGCCTTATTAAGTAAAGAGGTAAATGTGAACCTCAGAGTAGAAATTAAGTAACCTGAACGAAGGATAGAACTAAACAACCAATGCTTAAGGGATCGAGCCCCTCTCAGTGTATTTCAAGGTACACCAATTGAATTAGAAGGGGATACATACCAACCAACTAAAACTAACCCATCATCTAACAGAGGTATTGAACAGACATTGCTACAATAATAATTTGTGATGTAACGAATCTTTTTTTGAGAAGAGATGTCAGAAATTTTTTGTCATGGTGCAAGTTATGTAACAAGATGATCAGAGGGGGGATTTCTCGTTTAAAAGTGCATATTCTTGTCATCAAAGGAAACTATACCTCATGTCCAGCCGCAACTATAGAAGTACAAAAGAAAATTCAAGTTGCAGTAGATGAAATTAAAAAGAAAAAAGCAGAAAGTCATGAATTCATAATATTATAGAAATACAAGATGAAGATGAGGATATCAATGAAGATCAAGAAATTTTTGGTGGTGTGTGTATTGGTAAAAATAATGCAAACGCTTATATGGGTTATATGGGTAAAAATAATGCAAACGCTTATATGGGTTATATGGGTAAAAATAATGCAAACACTTATATGGTAAAATCAATGGATATCAATGTAATGTTATTATTAACTTGTTTAAGTTGTTTGATTCAAGTTCCTATTTTTGGCCAAGATTCAAAATCACAGTTGCATTATTAACCTATAGTTACATTGTTTAATTCAAGTTGCATACAACCCAAGGCAACAAAATAAAAGGGGACATGGACATACGAATTCATAGCAATAGGCATGGGAGTATGATCATATTTCAAGCATCAGTACAAAGCATTGGGACTACTCATATCCAAATGCAGACTTTGTAGAATGTGTAGGAATTGCTAATCTTTTTGAACAACCATGCTTTGGAAATTACTACTACACTAGGAGGGGAGGAGAAAATATGTCCATTCATAGCAAAATTGTCAGACTACTCATTAACAGAAAATGCTACGACAAATTTCCACATTTTTCTGTTCAATTTGTCAACCAAAATCCCAAGCAATTAAGATAAGTTTGAAGATACATAAGCAGAAATGTTCCTAATTTTCATTTGTTTAGTTCAAATTTAAACTAAACACATAATGGAATAAGTTGAAATTTTCATCTATGATCGTTGCACTCTAGATAATTTTAACGGATTACCTTCAACGATGGAACGCTCATATATATCATCACTATTCTCATCTAAAAAGGATGCCTGTTTAGAGCTATGATTTCCATCACGTGGGTTTGGCATATATTCCATTGCGTATCGAACTGATTCTGAAACAAGGTATGCTTCAGAAATTGATCCTTCAATATACCTTTTATTACTAGGTATGTTTTTACAATCCTTCATAGCCCTAGGACAAAAAAATTAACATGCATATTTACAGTTAGTTACTTCAAAGTAGTTAGGTAAAATAATTCGAATGCAAAAACAATATTTACCTTTCAAATGGATACATCCATATATAATTTGATGGTCCACAGAGTAGAGCTTGATTTGCTAAATGTACCATCAAATGGATACTTATATCAAAAAAGTGCATTGGAAGATAGTGTGCCAACACACATAATGCTTCAACAATCATATCTTTGGCCGCTTGTACATGTTCTCGAACTAGAACTTTCGAACATATTATGTTGAAGTACAGGCTTATTTGTAGAAGTGCTCGTCTTAACTCGCGACACTTTGGATATGAATGTTGAACCATGATAGGGAGCAAATATTGAATAATAATATGATAATCATATGTCTTCTTAATTTGCAAACTAGGTGGTTGAAGACCTATAAGACCATGTAACTTTGTTGCAAGACATGATGGAAGTTTTGCATCTTTAAGGACTTGACAACATTATAGCTTGTGAATCTTATCCCATGCATATTTAGAAGATTGTTTTCCTTTATCAAACATAAAGTTGATGAGATGTTCAGCAACATTTCTCTCAGTATGCATAACATCAATAGTATGACGAACTTTATGACTGCTCCAATAATCCAAGTCAAACAAAATTGACTTCTTATACCATGCCGGTCTTTCTTCATCATCAACAAGACAATCTACATTATCATAAGCTTCAGCAATCATTCTCTTTCTGCTTTGTGGTAGTTTTCCACAAATATATTTGATACGATCAAGCTTTTCTAAAAGAGACGAGCCCCTTAGTCGAGTCGGAGGCTCTTTATATTCAATATCCTTATACCATCCGTGTTTTAATGCTCTATATAGATGATCATCCTTCAAAAACCTTCTATATTTTGAATAGACGATCTTGTTGCCGATGTGCTCTGATTCTGTCTCAATAGCACAGACATGACACGCTTTATAACCGTGAGTCACACAACCAGATAAGTTACCAAATGCTGGTAAATCATGAATTCCCCATAATAATATTGCTTTCATATTGAAAATTTCTTGTTTATCCGCATCAAAAACAGACACTCCTTCGTCCCAAAGATGTTTTAATCATATATAAGAGGTTCCAAGTATACATCAATGTCCTGACTTGGTGCTCTTGGTCCAGGAATTAAAAGAGTCAACATTTGAAATTGTGATTTCATACACAACGAAGGGGGTAGGTTATAAGGTATCATATAAACAGGCCAACAACTATAACTATTGGAGAGAACGCCATTTGGGTTAAACCCATCGGTAGCAATACCAAGCCACACATTGCGTCCTTCATTAGCAAATTCTGGCCATCGACTTTTGATTGATCTCCATTCAGCTGAATCCATAGGATGTCGCATGGAATTCCAAGAGGGTGTGGCTTTCTTGTGCCATTGCATTTTACGAGCTATCCATGGTATAGTGTATAACCTACTTAATCTCGAAATTATAGGAAAGTATCTTAAAACTTTTCTTGGTTCTTTCGTTAATTTGACCTCCCCTAAAACTGTTTTTTTAGTTTTATACCTTGGTGTATGGCACTGAGGACATTCTTTCGCATCAACATTTTCTTTCCAAAATAATATGCAATCATTTTCACAAGCATGTATGCACTTCACCTCCATTCCCAGATCCTTTAATATTTTCTTCATTGGGGATACTTGTCAGGTAAATTATTTTCCTTTGGAAGCCAATGTTTTAATCGCTTCAACAACTCAGTCATACTGTTTCCCGACCAATTAAATTCTTTTTTAAGGTTATGAAGCTCAACAATTATGCCTAATGTTGTAAGCCCATCTTCACAAGAAGAATAAAGTTTTTCGTTTGCTTTGTTTGTATATTTTTTGTGCTTTTCTCCATGGTACGAATGAGAATTGTCTATATTTATCTCTTGAACATCCTCTTCACGGCTACTTTGGGGCATATTATGCACTCCAAAAGCATCGTCTATGAGATTTCTAAGAGCTCCTTCTACACAATGGTCTGTTTGAATTTGATCTTGGATATGAGAATCTGGAATAATATTTTGCGTATGATTCACCCCCATGTTATTCTTGTTCATCTCTCCATGGAAAAACCATCCATTATATGTTTTAATCATACCATGAATGATTAAATGTTTCTCAACGCTTTCCAATGAGAGCCTTTTAGAGTTCTTGCACTTGATACAAGGGCAAGTGCATATTTCGACATCGGGGGATGAGTGATTCTTCACAAAACTAATGAAGTCTCGAATGCCTTGCTTATATTCTTCAGTATTTCTGTATGGACTTTTAATCCACTCTCTTGAACTTGAGTTAGACATAAATTTCAAGTTTTACCTTTTGAACCTGTTAGACAAAAATATAGTGTTCATTTCATTTTAAAGTTCCATTACAATAACTTTGAAGGTCGGTCATCCTACTTCCCATTACAAACACAATAACGTAATCACATTTTATAAACCATTTCGGGTTAAACGATTCAACAAAATTTCGGCAGCACTTCCCTTTATTCCTTGTATCGTACACAAAAACGTGTACACAGGGAACAAAAAGGAAGTGCCATCGAAATTTTGTGAACCATTCAACCTGAAATGATTTATAAAATGTGATTACTTTATTATGTTTGTAACTTGTCCAATACTGGGACAAATCCAACAAATATTGTATCAGATGAATATAGATGTCCGTTCTATGAAAAACGAATATCCATATAACGATCAGATACAACACTTGTCATACGGGGCCAAAAAAATCTCTAAGGATTTACATGAAATTTTTGACGTGCACTACGCTATAAATGGCCTACTGCAACACAAAAAAAATGTTGGCTCAGGCCCGAAAAATGTTGCCATAGGTCTATGGCAACACTTTTAGGGTGATGCAATTTTTGCCGTTGCCTTAGACCTCAAAGGCAACATTTTTACTATCTAAGGCAACATAAGTAATATTGTTGCAATAGAACCCTATTTGGGTCTATGGCAACACCCATAGGTATCTGTAGCAACATTCCAAAATGTTGCTATAGATATGAACTTTTTGAATTTGTGGGGCCCACAATGTAGAGCATATTTGATTTTTTAATAAAAATAAATATTTATTTAATAAAATGCTATTACACAGAATTTGATATTTAAACAGTAATTTATTTAAATAAATATTTTATTTCAACATTTGAAATTGTACAAATTCCTGACTCCACTATTTTACAATACAATGATATATAACACTGATATTCACATATACAGATATTCCTCACTACATCACTCAGTTCACTCATTATATATGCAGTTTCAATTTATACATACACCGACACTGACAAATATATGCCGAGCCGAAGGCGAGCCGAGTGCCGAGCTGAAGGCGAGCCGAGAAGCGGGTCCGGGCGCGGCGCCGGCGGGGGTCCGGGGCACCGCAGTCCCGGCGGGGATCGACCTAAAATGATGCACAAATGAAGACTGAGCTTAATTCCTATCCTCCATCTCCTCGCCTAAATCTGCTTGAATCCCCTACGGCCAAACACCAAAACTCTACTGCAAACTCTTTTCAATTTCCAATCACCACATTAGCTTCTCTCCGTAACCAATACACAACAGCACTCTACCATTGTCAAACTCCAAACTCCGTCTACATCTCTCTGCCAACATTCAGGCATCACACTGCCAACTGAAACTCCTCTGCATCACCAACTTCCACCATCACTTCCATAACTTACCAAACCAACCAACCAACCTTCAACCAATACAACTACATCCAGATTCAATGGTGAACCAACCAACCAGATTATGAACTTGCAATGGACTTGCGATGGAGGCACAGGGCATCCAGAAGCAGTACATACCCAGCCAGATTCTGAAACATTAACAAGTGTTAAAGGAGCATTTGCACAAACATATGGGGGGCATACTATCTTATTGAAATTACCAGTACCAAGTGAAGCAACCGCAATCATAGGGGAAAGTACGAAGAGATCAGCCTGGGATCTGCTCTGAACTTGCGATGGAAAGTACGAAGTGAACCAAAATCTCGAGGGCAGCAGTTCAGGTTTTAGGAGAAATTAAGGCGCTAGAAGGGTTTTCAGGTGAAGTGGTCTAAAGGAGAAAGGTAGAGGGGTTGGTGGCGAGCAGGTCTTCTGTTGGAGGCGAGAGCTGATGGCGACGACAGCGGTGGCAAAAGGGGTTTGAACGGAAAACTTTGTTTGGCTTCGGGTTTTGGTGTCGTGACAGGGCTTTGGTTGGAGCTAGATGGTCGCGATGGGTCAGGGGGTAGCTGGGGGTGAGGGTGACAATTTGGTGGCGGAGGCGAATGAGGAAGCAGAAGAAAAGGAGGGAGACAATTTGGTGGCGGAGGCGAATGGGAGGAGGCGACTGGGAGGAGGCGAATGGGAGGAGACGAATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021738627.1	7.9e-33	transcription factor HBI1-like
Swissprot	Q9CAA9.1	2.2e-32	bHLH transcription factor bHLH049
trEMBL	A0A7J7L0Z7	1.2e-33	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G34530.1	41.44	2e-40	162	CIB1	cryptochrome-interacting basic-helix-loop-helix 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00438	AT4G34530.1	263	91	7	7	219	17	266	41.44	2e-40	162
AfisC1G00438	AT3G23690.1	177	64	5	48	218	120	284	53.67	6e-39	157
AfisC1G00438	AT1G68920.3	132	43	2	94	217	263	394	61.36	7e-39	157

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	136	184	30.0	3.5e-07

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009637	P	response to blue light
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0044212	F	transcription regulatory region DNA binding
GO:0040008	P	regulation of growth
GO:0043565	F	sequence-specific DNA binding
GO:0048446	P	petal morphogenesis
GO:1902448	P	positive regulation of shade avoidance
GO:2000488	P	positive regulation of brassinosteroid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network