Detail information of AfisC1G00477


Location
GeneChrStartEndStrand
AfisC1G00477chr17581894375846867+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241297.14.1e-259serine/threonine-protein kinase ATG1c-like isoform X1
SwissprotF4IRW0.12.5e-184Autophagy-related protein 1c
trEMBLA0A8B9B0205.2e-211serine/threonine-protein kinase ATG1c-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G37840.152.090.0 667Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain18272247.61.2e-73

Gene Ontology
AccessionOntologyName
GO:0000045Pautophagosome assembly
GO:0005515Fprotein binding
GO:0000407Cpre-autophagosomal structure
GO:0044409Pentry into host
GO:0004674Fprotein serine/threonine kinase activity
GO:0005776Cautophagosome
GO:0048102Pautophagic cell death
GO:0009306Pprotein secretion
GO:0009405Ppathogenesis
GO:0009847Pspore germination
GO:0016310Pphosphorylation
GO:0032258PCVT pathway
GO:0043936Pasexual sporulation resulting in formation of a cellular spore
GO:0097159Forganic cyclic compound binding
GO:0098805Cwhole membrane
GO:1901363Fheterocyclic compound binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08269ULK2, ATG1; serine/threonine-protein kinase ULK2EC:2.7.11.1 mTOR signaling pathwayko04150
Autophagy - animalko04140
Autophagy - yeastko04138
Autophagy - otherko04136
Mitophagy - yeastko04139
Longevity regulating pathway - wormko04212
K11912ppkA; serine/threonine-protein kinase PpkAEC:2.7.11.1 Bacterial secretion systemko03070
Biofilm formation - Pseudomonas aeruginosako02025

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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