result

Gene information

Detail information of AfisC1G00554

Location

Gene	Chr	Start	End	Strand
AfisC1G00554	chr1	87963284	87968754	-

Sequences

CDS

>AfisC1G00554
ATGGAAGGAAGTAAATTTGCTGGTGTAATTGGGGGAAACGAAAATGTAAACAATTTCTACGATTTAGGGTTTTATGCAAAACTGAACGAGGGGTCTACTGTCTCCGTAGACAGTAACAACAGTTCTGTTGCAATGTCAGTAGGCAATAGCAGTATTGGATCCAATAACAATTCACTTACTGGAATGTTAAAACATCCGGGTAACAAGCCCGTGCATTACTCGGAATATTCAGTGGGGCATAGTATGCTTCGACCTGGAAAAAGAATGCGTAACAATAACAATGATCATGTGTTCAAAGATGATGCATTGGCTAGGGCCCTGATGGACTTTAGTTACCCAAGCGAGTCCTTAGAAAATTACGATGAATGGACCATTGATTTGAGAAAACTGAACATGGGAATGGCATTTGCACAAGGAGCTTTTGGTAAATTGTACCGTGGTACGTATAATGGAGAAGATGTTGCGATTAAGCTATTGGAGAAACCAGAAAACGATTTGGAGAGAGCTCAACTAATGGAGCAACAATTTGCACAAGAGGTCATGATGCTTGCAAATTTGAAACATGATAATATAGTTAAGTTTGTTGGAGCTTGTAGGAAGAGAATGGTTTGGTGCATATTGACTGAATATGCAAAAGGTGGATCGGTCAGGCAGTTTCTGATGAAGAGGCGGAATAAGGCAGCGCCTTTGACGTTGGCAGTTAAGCAGGCATTGGATGTAGCTAGAGGAATGGAATACGTGCATGGGTTGGGGTTCATACATAGGGATTTGAAGTCGGATAATTTACTTATTTGTGGAGACAAGTCTATTAAGATTGCGGATTTTGGAGTTGCAAGGATTGAGGTGCAGACTGAGGGAATGACACCTGAAACCGGGACTTATAGATGGATGGCCCCAGAAATGATACAGCACCGGCCATACAACCAAAAGGTGGACGTGTACAGCTTTGGCATAGTCCTATGGGAGCTCATAACAGGCATGCTTCCGTTCCAGAACATGACAGCTGTCCAAGCCGCATTCGCCGTGGTCAACAAGGGGGCCCGGCCCATCATACCTGCCGACTGCCTCCCCATCCTTTCGGAGATCATGACTCGCTGCTGGGACCCCAACCCTGACGTCCGGCCCCCTTTCACCGATGTGGTTAAAATGCTGGAGACTGCGCAGGTGCATATCGGAGCTACTGTGAGGAAGGCCCGCTTTAGGTGCTGCATGGCCCAGCCCATGACAACTGAGTAG

Protein

Gene

>AfisC1G00554
TTCACTTCTTCGGTTTTCTTTAGTCGTCTCTCCAGTCTCCAGTCCACCGCTGCATAATAAAGACAAGCAAAAGAAAAATCAAAACAAATTAAAACTGGACTCTCATTCCAATCCATAAGCAATCAGAAGATTTATTTTTCCTTTCTAAATCAAATCAATTTGGTCCCCTACTACGCTGGCGATCTCATCTTCCTCCTCTCGTTTCCCTTCCGATCGATGTAAGTCTCAGTGAATTCAATGAAAGGTACGATTTTCACACCGGATGTAATCAAGAATTCAACTTGAGCCAATATTCAGCTCTAACTTTAGATTTCATGCAACTGAGTAAATAATTAGTTGCATATTGGTTATATTAAGCATAAAATTGATGGAAGGAAGTAAATTTGCTGGTGTAATTGGGGGAAACGAAAATGTAAACAATTTCTACGATTTAGGGTTTTATGCAAAACTGAACGAGGGGTCTACTGTCTCCGTAGACAGTAACAACAGTTCTGTTGCAATGTCAGTAGGCAATAGCAGTATTGGATCCAATAACAATTCACTTACTGGAATGTTAAAACATCCGGGTAACAAGCCCGTGCATTACTCGGAATATTCAGTGGGGCATAGTATGCTTCGACCTGGAAAAAGAATGCGTAACAATAACAATGATCATGTGTTCAAAGATGATGCATTGGCTAGGGCCCTGATGGACTTTAGTTACCCAAGCGAGTCCTTAGAAAATTACGATGAATGGACCATTGATTTGAGAAAACTGAACATGGGAATGGCATTTGCACAAGGAGCTTTTGGTAAATTGTACCGTGGTACGTATAATGGAGAAGATGTTGCGATTAAGCTATTGGAGAAACCAGAAAACGATTTGGAGAGAGCTCAACTAATGGAGCAACAATTTGCACAAGAGGTCATGATGCTTGCAAATTTGAAACATGATAATATAGTTAAGTTTGTTGGAGCTTGTAGGAAGAGAATGGTTTGGTGCATATTGACTGAATATGCAAAAGGTGGATCGGTCAGGCAGTTTCTGATGAAGAGGCGGAATAAGGCAGCGCCTTTGACGTTGGCAGTTAAGCAGGCATTGGATGTAGCTAGAGGAATGGAATACGTGCATGGGTTGGGGTTCATACATAGGGATTTGAAGTCGGATAATTTACTTATTTGTGGAGACAAGTCTATTAAGATTGCGGATTTTGGAGTTGCAAGGATTGAGGTGCAGACTGAGGGAATGACACCTGAAACCGGGACTTATAGATGGATGGCCCCGTAAGTTTATTTTTTGGCATTATTTGGTTTTAGCATTAATTCTACAAATGGTTTATTTAAATTGTTTTTCAGTGACTTATTCAGCTGACAGTATCAAATCCATAAACGGTTATATGTATGCAGTATTCTTAGTTTGAAACTTGACTGCTAGACCATTGTTTGTGTATTTAACAGCACTGATGTGTATTGCCTGGTGAGTTTGATTTTGTTGAAGGTGGGTTTAGGTCAAATTTAACACATATTAAACTTAGTTAGGCTGCATACACAATTTTATTATCAATGCTTGTGCTATGTTCATCAATTCCCCGAAAGACTGAATAAATCAGTAAAGCTTCTGTAGTTCTGCAAGTCGACAAACCATGCACATTCTCACATCACAACTATTGCTGTATTGCAACCGCATTTTGGTTGCACCTTGACAATAGAAGAAAGACTGAATCTATTTTTTAAATGAGGAATTCATTTGTTTAAAACAAAATATTACATTGTACTAAAGTTCTATGAGTTAAAAAAACAAAACACCGAATCTTGATTTGATTTGTCTTACAATCATTTGATCATGAAGATCCATATATCATCGAACTAAGAATTCTTATAATTGTTGACCTGTAGATTTAACATTGAAAAAGTTAATAGCAATAATTTTTATTTATAAGTCAAATCAAACGACATACACTTTATATAAGCGCCCGCTCACACGCTTATTTCATATATCATCTTTAAATTTAGCTTGTGCTTTTTTATTCTATAATCCCACAATATTCTTCTAATTTATAGGCACTTTGCAATAGCTTATCACTTAAAAGGACGAATTTTATCTCTGTGCAATTTCAAAGTTGGATTTGAAACCTAAGTTAAATGTGATGAAATTTGAAGCTAAGGATTCTGACATTATTTAATTTGGAAGAATTGCAATATATTTTTAACCGTTAATTAGAAAGAAAATTTTAATTGCATGCTATACATCAAGAGATATTCTTTCTGTTCGAGAAATTAGAATATAGGATAGCCACTGTAATTGATTGAAGTTATGTCACTCAAGCGATAAGCAACAACATTTGTCATTATAACAATATGATGTCGTTATGATATCACTATTTTGCTGTGAAAGAGATGCATATTAAATTACTACTCTTTTGGTTTGCCCTAATTATTGAGTTGCCTGACTTGCCCCCACAATATTTTGATTTGTCAAAATTTCTCTGTGTGTGTTTTTTTTTTTTGGGTGAAAATGAGGTCAAATGTCTTGGTTATGGAGCAAGGTTCAAGAATGCTTATAAAGTCATTTTTTTGTTTATATTAACAAAATTCTAATATACTAAATATTAATAGGTGTTTAAACTTTAAAGTTACCCATTACATTATGAAAGTAACTTACATGAAAGCAAGGTTCAGTAATTTGCTATGAAAAGAAATTGTTTTTTCTCGAAATAACATGAAGTAACTTGTTTTTTCTGAAAAAAATGATCAAAAAATGATACTCAATGAAAGTACATCAAGGCTTAATTGAAAAGAAAATCCATTTTTGGTGCTCATACCGAGCCATTTTTTGTAAATTATAGTATTGCTTTTGAACATAGAAAGAAAAAGAAACAGGATACTGACTTTGTCTAGGATTACCATGTTTTTCTACTTTGACCAGCATATTTTCGTTTTGTGTGGGAAAATCTAGCATATTTAGATGCAAAAATTAATGTAAAAACCAAGCAATGTCAAATAATAGGAAACAAGTCCTTGACTTGATGTTGTATTAATTTTGAAAAGATAATTTCAGTCAAACAATTATCATATTTTCCTATAACAAGACTGTTACAGATTTATCATTATTCATATCTTATTTTTATACATATCACTTTTGTTCCTCGTAATGTTAAGCGGCAATCATGGTTTAATACAGCAGTAAGTATTAATCCATAAGCCTTCGTGAAGCAAAACTTGATGCATAAGGATTCATGCCATCTATGGTTATGAGAGGTTTCAAATAGTGCAACACCAATTTTCTTATATCCAACAAGAGTTGCTGAATTAACATTATTCTTTACTATATATATCAATATTCGGTTGCATGAACTTGTTCCACTTATTTATTTTCTTCTATTTACAATTGTTTTCATATCCCAAAGGGGAGTATTTTTGCATGAGGGTACCGGTGCTCAAAAGAAAATCCATGCTGCTCAATGCTTGACACTATTTAAAGCAAGATAATCATTAGTCTAACTGTCCGTTAACCAGAAACTAATGTCTTCTTTAGTAGTTCATGAAGTAGAGCCTAATAAGTATTTGTTCTATTTAAGGATATCGATAGATTTAAAATAGATAGAGAAGTAGAGAGTCCAATGCATAAAATCTTATAATGCACTTTTCTAGTCATTATAGTTTCCTCATCCAAAACAAGAATAACGACATCAACATTATTCATTATCATCTATATTAGCAGTCAAATTCATGAACTTGTTTCATCTATTCATTTTGTATGAGTGTGCATGTTCCATATCATCACACTGTTCATGTTAAGTTAAAAGGATTATTTTATTTGAAATCATTTGTGTCTCCTTTCAACACATAATGCACTTCTGGATCATTTTGAAAACTATTTGCAAAAGATCATTTTATGCCTGTGCGTATGGCTATTATGGTAATGCTAAATTGACCATTACCATATCAATACCAAACAATTAGTAGACAATATTAAGCTACATCGGTATAACAATATTATCGGTACCGTAACATTAACTTTACTATAATTAACGATAAATGTGGCGATAAATAAATGTCAAAACCAGTGATAATGGTAATTTTACCAGTCATATTAATTTGGTTTTTCACCATTTTTTTTATCCTAACCATATGCAATTTTGAAGATATATCAGATTTTAAGAAGATATTTCTAGTATTATTTAAGATAATGTTCCATTTTAGTTTTTCTAACTCCATAATCCGAGATTATAAGTGTTGTTGTTTTGTAGTATTGTGAATCAAGAAAACTTTCTACATAAACTGAAGTAAATCAAAATGTTGATATAATCATTGATAGAGTTAGAATCAATAACAGAATTGTTACCATTTTATCATGATCAAAATCTTAATGTAATAAAATTTTAATATTTTTATGCATTGGTAAATTTATCATTACCCGTCAACGGTTTACCGGGTTATCGGTATACCCACGATCATTTTACCCATGGTAATGGTAAAACATCAATAGTCATTTTTGATTTAACAATAATAGTGGTACGGTAATGGTTTTCTCGTATTAGTAAGGGTTATCATTAACGTACTCTTACCCGTGCGGCAGAAAATAATTTTTAGTACTTGAGTTATTTGGAACAATATCAGTTCAATTTTTCTTCAAAACAAAATGCAATGGAGCAATTTCAAACTGTGCAAGTCCATTTCTTTCAAAATAAAAAAAGAAAAAAAGAAAAAGAATTCAGCATTAGCACATTATTGAAGGGGAAATTTCACTTGTGTTGTTTGGAACCACTTTAGTGCAATATGATGTAGAAACTGATCCATTTCTGTAGATAATGTTTTGAGAACAGGCTAAATGCACAGTAGGTAATCAAGATGATAGATGAGGGGCCAAAAAAAAAAAATCAATATATTATCAACAAATTTACATGCTAACTAGCTACATTCATTTGCAGAGAAATGATACAGCACCGGCCATACAACCAAAAGGTGGACGTGTACAGCTTTGGCATAGTCCTATGGGAGCTCATAACAGGCATGCTTCCGTTCCAGAACATGACAGCTGTCCAAGCCGCATTCGCCGTGGTCAACAAGGGGGCCCGGCCCATCATACCTGCCGACTGCCTCCCCATCCTTTCGGAGATCATGACTCGCTGCTGGGACCCCAACCCTGACGTCCGGCCCCCTTTCACCGATGTGGTTAAAATGCTGGAGACTGCGCAGGTGCATATCGGAGCTACTGTGAGGAAGGCCCGCTTTAGGTGCTGCATGGCCCAGCCCATGACAACTGAGTAGAACAGTGAAATATGTGGGAAAAAGAACAATGCTGTTAAGTTAGTTATATGTGGTGTTTGATGTATTTGATGGATATGGTGTGCTCTGTTGTTTTTGAATTGGATGTTGTGCTGCTGTTGTATATCAATCTGAAATCCTTTTATTTATCTTTGGATTTTAACTGCTTTCTCCTTTTTGTTTTTTGTTTTTTTTTTAAATTCATGAACACAAGTTTGTCATCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267222.1	2.8e-194	serine/threonine-protein kinase HT1-like
Swissprot	Q9ZQ31.2	1.1e-166	Serine/threonine/tyrosine-protein kinase 13
trEMBL	A0A6P5ENY3	4.6e-178	serine/threonine-protein kinase HT1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G24360.1	70.24	1e-167	585		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G00554	AT2G24360.1	420	106	4	1	411	2	411	70.24	1e-167	585
AfisC1G00554	AT4G31170.3	421	114	7	1	411	2	412	68.17	6e-165	577
AfisC1G00554	AT4G31170.2	421	114	7	1	411	2	412	68.17	6e-165	577

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	132	384	218.5	8.2e-65

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005829	C	cytosol
GO:0004706	F	JUN kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005856	C	cytoskeleton
GO:0007224	P	smoothened signaling pathway
GO:0007256	P	activation of JNKK activity
GO:0009658	P	chloroplast organization
GO:0010119	P	regulation of stomatal movement
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0031434	F	mitogen-activated protein kinase kinase binding
GO:0031624	F	ubiquitin conjugating enzyme binding
GO:0042803	F	protein homodimerization activity
GO:0043425	F	bHLH transcription factor binding
GO:0043433	P	negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043507	P	positive regulation of JUN kinase activity
GO:0043525	P	positive regulation of neuron apoptotic process
GO:0046777	P	protein autophosphorylation
GO:0048365	F	Rac GTPase binding
GO:0048793	P	pronephros development
GO:0071570	P	cement gland development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network