result

Gene information

Detail information of AfisC1G00616


Location
GeneChrStartEndStrand
AfisC1G00616chr19707395397102614+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020266104.11.9e-259serine/threonine-protein kinase TOUSLED
SwissprotQ39238.11.1e-211Serine/threonine-protein kinase TOUSLED
trEMBLA0A5P1FV561.3e-259Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G20930.163.750.0 848TSLProtein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag80654.t1
Allium fistulosumAfisC1G00616
Allium sativumAsa5G03918.1; Asa7G00860.1
Arabidopsis thalianaAT5G20930.1
Oryza sativaLOC_Os03g53880.1; LOC_Os03g53880.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain401673201.41.5e-59

Gene Ontology
AccessionOntologyName
GO:0000070Pmitotic sister chromatid segregation
GO:0000794Ccondensed nuclear chromosome
GO:0000776Ckinetochore
GO:0000779Ccondensed chromosome, centromeric region
GO:0000910Pcytokinesis
GO:0000922Cspindle pole
GO:0001672Pregulation of chromatin assembly or disassembly
GO:0005882Cintermediate filament
GO:0004674Fprotein serine/threonine kinase activity
GO:0035556Pintracellular signal transduction
GO:0005524FATP binding
GO:0005815Cmicrotubule organizing center
GO:0006886Pintracellular protein transport
GO:0006974Pcellular response to DNA damage stimulus
GO:0006997Pnucleus organization
GO:0007088Pregulation of mitotic nuclear division
GO:0007127Pmeiosis I
GO:0008589Pregulation of smoothened signaling pathway
GO:0042802Fidentical protein binding
GO:0009507Cchloroplast
GO:0018105Ppeptidyl-serine phosphorylation
GO:0022411Pcellular component disassembly
GO:0030054Ccell junction
GO:0031023Pmicrotubule organizing center organization
GO:0032435Pnegative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0033365Pprotein localization to organelle
GO:0044454Cnuclear chromosome part
GO:0045132Pmeiotic chromosome segregation
GO:0045786Pnegative regulation of cell cycle
GO:0045862Ppositive regulation of proteolysis
GO:0048471Cperinuclear region of cytoplasm
GO:0051225Pspindle assembly
GO:0051304Pchromosome separation
GO:0051443Ppositive regulation of ubiquitin-protein transferase activity
GO:0070507Pregulation of microtubule cytoskeleton organization
GO:0071480Pcellular response to gamma radiation
GO:0090304Pnucleic acid metabolic process
GO:1901990Pregulation of mitotic cell cycle phase transition
GO:1903827Pregulation of cellular protein localization
GO:1904666Pregulation of ubiquitin protein ligase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08864TLK; tousled-like kinaseEC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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